Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0580 ATGCATATAGAGGAATTGAAGGGAGGTGAGGTGGTAGAAGGTGGGGAGGAAGGAGGATCGAGGTTTGTGGGCTCTGATGCGAAAAGGGTGCTGGTTGGAGCAGGCGCACGTGCGCTTTTCTATCCAACCCTGTTTTATAATGTCGTTAGAAATAAGATTCAGGCTGAGTTTCGATGGTGGGATAAGGTTGATGAGGTTGCTCATAAATCTGATGCACATAATTTCCAGTTCATATTGTTAGGTGCTGTTCCATTTCCTATTGATGTTCCCCACTTAAAGGAGCTTGGTGTTCGTGGGGTCATCACATTGAACGAGTCATATGAGACTTTGGTTCCAACGACTTTATATTATGCTCATGGAATTGATCATCTGGTGATTCCTACTAGAGATTACTGTTTTGCTCCTTCATTGCATGACATTTGCCGTGCTGTGGACTTCATACATGAGTGGCCAACAGAATGGAAGCATCATGAATTAATGTCAGTAGTGTGTTGTATTAAAATGCATTGTCGGGACGAACTACGTATGTCCATTGCAAAGCTGGACGCGGTCGCAGCACGACTATTGTTATTTGCTATCTGGTTGGTGCACTACAAAATGATGACACCTGATGCCGCATATGAATATTTGAAATCAATTCGACCAAGGGTGCTTCTAGCTTCCTCTCAGTGGCAAGCTGTCCAAGAATACTACTACTATGTTATGGTGAGGAGGGCTATTGGATGCGCCCCCACAGTCAATCTATTAGTAAAGGCTTCTCCGGTGGCAGCAGGTTCACGAGATATTGTGATGTTTGATGACAACTCTGTAGTCATGGTAACAGAGTCAGATCTGGAAGGTTACAACCCAAGCAGCAGTCAATCAGGAGCCATGGCAAGTGAAATATGGGCAGATTTAAGTGTTGTATACCGTGTACGTGTTGCTGGACAGGCGGCACTGGCGAGAATATCATGCCTTTGGCTGCGATATGGTACCACCACCACCACCAACCAGAAGATTTCAACAGAGAAACTGAGCGGGGGTAGCAGCAGGGAAAGCAGTTGCTCAATTAGTGCTAATCACTTGGGAGAAATTAGTGTCGATATCCACGTCTACTGA 1098 0.4526 MHIEELKGGEVVEGGEEGGSRFVGSDAKRVLVGAGARALFYPTLFYNVVRNKIQAEFRWWDKVDEVAHKSDAHNFQFILLGAVPFPIDVPHLKELGVRGVITLNESYETLVPTTLYYAHGIDHLVIPTRDYCFAPSLHDICRAVDFIHEWPTEWKHHELMSVVCCIKMHCRDELRMSIAKLDAVAARLLLFAIWLVHYKMMTPDAAYEYLKSIRPRVLLASSQWQAVQEYYYYVMVRRAIGCAPTVNLLVKASPVAAGSRDIVMFDDNSVVMVTESDLEGYNPSSSQSGAMASEIWADLSVVYRVRVAGQAALARISCLWLRYGTTTTTNQKISTEKLSGGSSRESSCSISANHLGEISVDIHVY 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0580 365 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 74 235 IPR029021 -
Aed6g0580 365 PANTHER - 1 365 - -
Aed6g0580 365 Gene3D Protein tyrosine phosphatase superfamily 75 238 IPR029021 -
Aed6g0580 365 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0580 Aed-Chr6 4884107 4888024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0580 28 365 Protein tyrosine phosphatase (PTP) family AT2G35680 49.565 5.50e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0580 - - gmx:100790413 518.464