Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0573 ATGGGCATGGAAGAATCTAACCCTTTAGACAATGAAGTTCAACCAACAACTTCTTCCACTTCCTCTTCCTCCTCCATAGAAGAAACCACTACCACTACTAAGGAGAAAAAAAAAAAAAGAGCCAATAATAATAATAATAATAATGAAGGGAATAATCACCCTACTTATAGAGGAGTTCGCATGCGCCAATGGGGCAAATGGGTGTCCGAAATTAGAGAGCCAAGGAAGAAATCAAGAATTTGGCTTGGAACTTTTCCCACGCCGGATATGGCAGCTCGAGCCCATGACGTCGCGGCTCTCACCATCAAAGGCAGCTCGGCTTACCTCAATTTCCCCGAATTAGCCGCTGAGCTGCCCCGCCCCGCCACCACCTCACCCAAGGACATCCAAGCCGCGGCAGCCAAAGCTGCAGCTTTAGATTTTGGCCACCGGAGCCATGAAGCCGAGTCCGAGCTGAGCCGAGCCGTTTCACAAGCATCATCCAATTCCTCGTTGAAGGGTGTGGATGACACATTCTTGGACCTCCCTGATCTCTCTCTCGACTTGAGCCATGGAGCCGACGAGTTTCATTATTCCTCGGCTTGGCTCGTAGCCGGAGCCGAACACATAGAGCTGGGTTTCCGGCTTGAGGAGCCTTTTCTATGGGAATCATATTAA 657 0.4977 MGMEESNPLDNEVQPTTSSTSSSSSIEETTTTTKEKKKKRANNNNNNNEGNNHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAELPRPATTSPKDIQAAAAKAAALDFGHRSHEAESELSRAVSQASSNSSLKGVDDTFLDLPDLSLDLSHGADEFHYSSAWLVAGAEHIELGFRLEEPFLWESY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0573 218 SUPERFAMILY DNA-binding domain 55 113 IPR016177 GO:0003677
Aed6g0573 218 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Aed6g0573 218 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Aed6g0573 218 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Aed6g0573 218 CDD AP2 56 114 IPR001471 GO:0003700|GO:0006355
Aed6g0573 218 Pfam AP2 domain 54 104 IPR001471 GO:0003700|GO:0006355
Aed6g0573 218 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
Aed6g0573 218 MobiDBLite consensus disorder prediction 1 58 - -
Aed6g0573 218 MobiDBLite consensus disorder prediction 9 29 - -
Aed6g0573 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 17 215 - -
Aed6g0573 218 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Aed6g0573 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0573 Aed-Chr6 4821106 4821762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0573 48 214 AP2-EREBP Transcription Factor Family AT2G44940 52.451 3.39e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed6g0573 AP2 8.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0573 - - gmx:100101914 316.62