Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0567 ATGGGTGCCTACAAGTATGTTTCGGAGCTATGGCGCAAGAAGCAGTCTGATGTCATGAGATTCTTGCAGCGGGTGAGGTGCTGGGAGTACCGCCAGCAACCTTCTATTGTCCGTCTGACAAATCCTACTCGCACAGACAAGGCTCATCGCCTGGGCTTCAAGGCTAAGCAGGGTTATGTGGTTTACCGTGTCCGTGTCCGTAGGGGTGGCCGGAAGAGACCAGTTCCCAAAGGTATTGTTTATGGTAAGCCAACCAATCAAGGTGTTACCCAACTGAAATTTCAGCGCAGCAAGAGGTCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGACTCAGGGTCCTCAATTCTTACTGGGTGAACGAGGACTCAACTTACAAATATTTTGAGGTCATTTTGGTGGATGTTGCCCACACTGCTATCAAAAATGATCCAAGAGTCAACTGGCTCTGCAACCCAGTTCACAAACACAGGGAACTTCGTGGCCTCACTTCTGCTGGGAAAAGTAACAGGGGTCTACGTGGCAGGGGACATCTCTACCACAAAAATCGTCCATCCCGCAGAGCAACCTGGAAGAGAAACAACACACTTTCTCTTCGTCGTTACCGTTGA 615 0.5024 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTNPTRTDKAHRLGFKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEVILVDVAHTAIKNDPRVNWLCNPVHKHRELRGLTSAGKSNRGLRGRGHLYHKNRPSRRATWKRNNTLSLRRYR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0567 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Aed6g0567 204 MobiDBLite consensus disorder prediction 175 189 - -
Aed6g0567 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
Aed6g0567 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aed6g0567 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aed6g0567 204 MobiDBLite consensus disorder prediction 164 189 - -
Aed6g0567 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Aed6g0567 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0567 Aed-Chr6 4762165 4764149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0567 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 88.725 3.74e-124 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0567 K02877 - gmx:100810310 389.037