Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0516 ATGGATTTTAAGTCCTCTCATGTTTCTCCTTTTCTCACTGATCCTGTTCCTGTCAACAAGTCCAGGCTTCGAATGCATTCGAGTTTGCTAGCTTATTCCCAGCAAGATTCGCCACTCTCTCCAGGGAAGTGCTCAAGAAGCAATTCAAGGAAAAGCATGGGGGGTGTGGATGATGTCAGGTCCAATGGCTGGTTGGATGCCATGAAGGCTTCTTCACCTCCAAGGAAGAAACTGCTTAAAGGCTCTCAGGTTGCTTCTGTTGATGATGACTTTGAAGACTATCAATCATGGATGCTTGAATATCCGTCAGCACTAGACTCTTTTGAGAAAATCATTGACCTTGCAAAGAATAAGAAGATTGCAATGTTTCTAGATTATGATGGCACACTTTCACCAATAGTAGATGATCCGGATAGTGCCTTCATGTCCGAACTTATGCGTACGACTGTGAAAAGAGTGGCAAAATATTTCCCCACAGCAATCATCAGTGGAAGAAGCCGTGACAAGGTTTTTGATTTGGTTAAACTAACAGAACTCTACTACGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTTTGTGAGACTTTTTCCAAAAATCACCCAAATTGTGTCAAGTCTCCTGACCATCAGGGAAAGGAAATAACTCTTTTTCAACCTGCAAAAGAATTCCTGCCTATGATTGATGAGGTTTATAGAATCCTCGTCGAGATTACTCAGGATATACCAGGCGCAAATGTTGAAAATCACAAGTTTTGCGCCTCTGTACATTACCGTAATGTAGAGGAGAATAATTGGACAACGATTGCACAACGTGTACATGATGTCTTGAAAGATTACCCTCGTTTACGTTCAACTCATGGACGGAAGGTTTTAGAAGTTCGTCCTGTGATTGATTGGAATAAAGGAAAAGCTGTTGAATTTTTACTTGAATCTCTAGGGTTAACCGATAGTAATGATGTGCTTCCCATCTACATTGGAGATGATAAAACTGATGAAGATGCATTCAAGGTCATGAAATTTCTCCAACTCTTGGTGAACTGGAAGAGACAAGAAAGAAAGCATGGGAGGAAGTAA 1077 0.4132 MDFKSSHVSPFLTDPVPVNKSRLRMHSSLLAYSQQDSPLSPGKCSRSNSRKSMGGVDDVRSNGWLDAMKASSPPRKKLLKGSQVASVDDDFEDYQSWMLEYPSALDSFEKIIDLAKNKKIAMFLDYDGTLSPIVDDPDSAFMSELMRTTVKRVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVCETFSKNHPNCVKSPDHQGKEITLFQPAKEFLPMIDEVYRILVEITQDIPGANVENHKFCASVHYRNVEENNWTTIAQRVHDVLKDYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLTDSNDVLPIYIGDDKTDEDAFKVMKFLQLLVNWKRQERKHGRK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0516 358 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 122 340 IPR006379 -
Aed6g0516 358 CDD HAD_TPP 121 340 - -
Aed6g0516 358 Gene3D - 209 297 - -
Aed6g0516 358 MobiDBLite consensus disorder prediction 34 55 - -
Aed6g0516 358 Gene3D - 122 339 IPR023214 -
Aed6g0516 358 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 340 IPR044651 GO:0004805|GO:0005992
Aed6g0516 358 Pfam Trehalose-phosphatase 123 343 IPR003337 GO:0003824|GO:0005992
Aed6g0516 358 TIGRFAM T6PP: trehalose-phosphatase 118 350 IPR003337 GO:0003824|GO:0005992
Aed6g0516 358 MobiDBLite consensus disorder prediction 34 58 - -
Aed6g0516 358 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 340 - -
Aed6g0516 358 SUPERFAMILY HAD-like 121 340 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0516 Aed-Chr6 4435148 4437452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0516 107 337 Trehalose Biosynthesis Gene Families AT1G70290 27.500 4.79e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0516 K01087 - vvi:100254004 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0516 6 4435148 4437452 Aed6g0516 6 4435148 4437452 ECH