Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0512 ATGTCATCATCCTCTAATCCCACCACATTATCACTGGACCACCTCCCTCCTTCCGAACAGCTTTGTTATGTTCACTGCAATATTTGTGACACCGTCCTCGCTGTGAGTGTTCCTTGCACAAGCTTGTTCAAGACCGTCACTGTCCGATGCGGCCATTGCACTAACCTCCTTCCAGTGAACATGCGTGGCTTGCTTATGCCATCTCCCACTCAATTTCATTTGGGTCACTCTTTTTTCTCCCCGTCTCATAACCTTCTGGAGGAGATACCAAACCCCACTCCAAATTTTCTTATGAACCAAACAAATTTCAGTGCATCAAATGAGTTCTCTATGCCTGCTAGGACTGCAGCTGATGAGCTTCCACGGCCACCGATCATAAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCAGCGTACAATCGCTTTATCAAGGACGAGATCCAACGCATCAAGTCTGTGAATCCCGATATAACTCACAGGGAAGCCTTCAGTGCAGCTGCAAAGAATTGGGCCCACTTCCCACACATCCACTTTGGTCTCATGCCTGATCAGACTGTGAAAAAGACAAATGTGTGCCAGCAGGAAGGAGAAGAGGTTCTCATGAAAGATGGCTTTTATGCTTCAGCTAATGTTGGTGTCTCACCCTACTAA 654 0.4725 MSSSSNPTTLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLMPSPTQFHLGHSFFSPSHNLLEEIPNPTPNFLMNQTNFSASNEFSMPARTAADELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVCQQEGEEVLMKDGFYASANVGVSPY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0512 217 Pfam YABBY protein 17 181 IPR006780 GO:0007275
Aed6g0512 217 SUPERFAMILY HMG-box 125 174 IPR036910 -
Aed6g0512 217 Gene3D High mobility group box domain 126 189 IPR036910 -
Aed6g0512 217 PANTHER PROTEIN YABBY 4 1 215 - -
Aed6g0512 217 PANTHER PROTEIN YABBY 6-RELATED 1 215 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0512 Aed-Chr6 4390030 4393046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0512 28 215 C2C2-YABBY Transcription Factor Family AT4G00180 59.330 9.53e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aed6g0512 YABBY 8.9e-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0512 K25796 - gmx:100798441 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0512 6 4390030 4393046 Aed6g0512 6 4390030 4393046 ECH