Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0505 ATGGCAGCAAAACTACAAAGCCTTTCTCTGCTACTCCTTCTTTTTCACACCGCAGTTGCCAAACGAACCAATAACCCAGCAACAGCAACAACAGACTTCATAAAGTCCTCATGCAAGGCCACGCGCTACCCCGTGGCGTGCGTCCAGAGCCTCTCGGGCTACGCCAGCGTGATTCGGCAGAGCGAGAAGCAGCTCGCAGTGACGGCCCTGTCCGTGAGCGTGTCCAAGACGCGCTCGTGCGCGTCGTTCGTGAAGAGAATGGGGTCTGTGAAGGGAATGAAGCCCAGAGAGTACAACGCTCTGCGAGACTGCGTTGAGAACATGAACGACAGCGTGGACCGTCTCACCCAATCGGTGAACGAGCTTGGGCTCGTGGCCAAGGCCAAGGATTTCGCGTGGCACGTGAGTAATGTCCAGACTTGGGTTAGCGCTGCCATCACCGATCAGGACACGTGTCTTGACGGGTTTGATGGGCCCCACGTCGACGCCAACTTGAAGGCTTCCGTTAGGCCCAGGGTTGTGGAAGCTTCTCAACTCACTAGTAATGCTCTTGCGTTGGTTAATCGCTTTGCCTCCAACTATCGTTCTTCTTCACTAACTTAA 603 0.5506 MAAKLQSLSLLLLLFHTAVAKRTNNPATATTDFIKSSCKATRYPVACVQSLSGYASVIRQSEKQLAVTALSVSVSKTRSCASFVKRMGSVKGMKPREYNALRDCVENMNDSVDRLTQSVNELGLVAKAKDFAWHVSNVQTWVSAAITDQDTCLDGFDGPHVDANLKASVRPRVVEASQLTSNALALVNRFASNYRSSSLT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0505 200 SMART PMEI_2 29 186 IPR006501 GO:0004857
Aed6g0505 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 191 IPR035513 -
Aed6g0505 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 190 IPR035513 -
Aed6g0505 200 PANTHER PECTINESTERASE INHIBITOR 9 11 194 - -
Aed6g0505 200 CDD PMEI-like_3 36 192 - -
Aed6g0505 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 194 - -
Aed6g0505 200 Pfam Plant invertase/pectin methylesterase inhibitor 32 186 IPR006501 GO:0004857
Aed6g0505 200 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0505 Aed-Chr6 4330802 4331404 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0505 21 187 Carbohydrate Esterase AT3G14310 30.952 6.22e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0505 - - gmx:100789460 315.464