Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0497 ATGGGTTTTCAACAGAACAACGTCAACAACGGCCCGAGCTACCCATGTTCGGAGCCATGCGCCAACAACTGCGGCTTCTTCGGAAGTTCCGAGAAGCGAAACCTCTGCTCGAAATGCTACAAGGAGTTCTGTCTGGTTGAGGAGCTTGCCGCAATGAAGACCGTGAAGTGCTCCGCCGCGTCGCCACTCTCGCCGGCGGAGCAGTCGAACCGGTGTGGGACATGCAACAGAAAAGTGGGTTTAACCACCGGTTTTGTATGCAAGTGTGGGAGTACCTTGTGTGGGCTGCACCGTTACCCGGAGATACACAAGTGCTTCTATGATTTTAAGGCTGCGGGGCGCGAAGCCATTTCTAAGGCAAATCCTGTTGTTAAGCGTGACAAGCTTCAAAAGTTTTAG 399 0.5288 MGFQQNNVNNGPSYPCSEPCANNCGFFGSSEKRNLCSKCYKEFCLVEELAAMKTVKCSAASPLSPAEQSNRCGTCNRKVGLTTGFVCKCGSTLCGLHRYPEIHKCFYDFKAAGREAISKANPVVKRDKLQKF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0497 132 SMART AN1_Zf_4 72 110 IPR000058 GO:0008270
Aed6g0497 132 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 55 - -
Aed6g0497 132 SUPERFAMILY AN1-like Zinc finger 61 127 IPR035896 -
Aed6g0497 132 Pfam AN1-like Zinc finger 72 108 IPR000058 GO:0008270
Aed6g0497 132 Pfam A20-like zinc finger 19 41 IPR002653 GO:0003677|GO:0008270
Aed6g0497 132 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 54 - -
Aed6g0497 132 ProSiteProfiles Zinc finger A20-type profile. 14 48 IPR002653 GO:0003677|GO:0008270
Aed6g0497 132 SMART A20_3 17 41 IPR002653 GO:0003677|GO:0008270
Aed6g0497 132 Gene3D - 47 128 IPR035896 -
Aed6g0497 132 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 1 55 - -
Aed6g0497 132 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 62 132 - -
Aed6g0497 132 ProSiteProfiles Zinc finger AN1-type profile. 66 113 IPR000058 GO:0008270
Aed6g0497 132 PANTHER AN1-TYPE ZINC FINGER PROTEIN 62 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0497 Aed-Chr6 4290438 4290836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0497 20 132 C2H2 Transcription Factor Family AT3G52800 41.667 4.20e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0497 - - gmx:100787871 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0497 6 4290438 4290836 Aed6g0497 6 4290438 4290836 ECH