Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0494 ATGGATCCACTCTCAGCACATGGTCATTCCCTTCCTCCTCCTTTTCACACTAGAGATCTCCACCTGCACCACCAGCAACAGTTCCAAGGCTTGAACCAAGGCACCGAGGAGGACGAGAACAGTGGCAGCAGCGGCGCGCACAAAAGGCGCCGCGAAGAAAACGACAGCAACGGAAACGGCAACAACGAAGGCGGAGGTGAAGGTGAGATAACAAGAAGGCCTCGAGGAAGACCAGCAGGATCCAAAAACAAGCCGAAGCCACCCATTATCATCACTCGTGACAGCGCCAACGCCATGAGAACCCACATGATGGAGGTAGCGGACGGCTGCGACATCGTGGAAAGCGTGTCCGACTTCGCCAGGAAACGCCAGAGAGGGGTTTGCATCATGAGCGGCACCGGCACCGTCACCAACGTCACCCTCAGGCAACCGGCTGCTGCCGGTTCTATTGTGAGCCTTCACGGAAGGTTCGAGATCTTGTCCCTCTCGGGATCGTTCCTTCCACCACCTGCGCCACCGGCCGCATCTGGTTTGACCATCTATCTGGCTGGTGGACAGGGACAGGTTGTGGGAGGAAGTATCATTGGAACACTGATCGCTTCGGGGCCAGTGGTCATCATGGCTGCTTCCTTCAGCAACGCTGCTTATGAGAGGCTTCCTTTGGAGGATGAGGACCCTACGCTGCAAATGCAAGGCGGAGGAGGAGGAGGTTCAATTGGTTCACCCGGTGCAAGTGGAGTTGGTCAGTCACAACAGCAGCTTCTAGGAGGGGATGCAACTGCTCCACTCTTCCATGTTTTAGGTGATATAAAATGTGTTCTTTTACATGAATTTGAGACTGTAATTAAACTGATGAATTTTTATATCCTTGCTGAGTTTGATTCTGTTGATGACAATGGAGTGCTTCTATATATGTTCGGTCGTGTTTCTCGTGATTGA 939 0.5282 MDPLSAHGHSLPPPFHTRDLHLHHQQQFQGLNQGTEEDENSGSSGAHKRRREENDSNGNGNNEGGGEGEITRRPRGRPAGSKNKPKPPIIITRDSANAMRTHMMEVADGCDIVESVSDFARKRQRGVCIMSGTGTVTNVTLRQPAAAGSIVSLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSIIGTLIASGPVVIMAASFSNAAYERLPLEDEDPTLQMQGGGGGGSIGSPGASGVGQSQQQLLGGDATAPLFHVLGDIKCVLLHEFETVIKLMNFYILAEFDSVDDNGVLLYMFGRVSRD 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0494 312 MobiDBLite consensus disorder prediction 225 251 - -
Aed6g0494 312 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 228 - -
Aed6g0494 312 MobiDBLite consensus disorder prediction 24 40 - -
Aed6g0494 312 CDD DUF296 100 211 IPR005175 -
Aed6g0494 312 ProSiteProfiles PPC domain profile profile. 96 231 IPR005175 -
Aed6g0494 312 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 267 - -
Aed6g0494 312 MobiDBLite consensus disorder prediction 1 91 - -
Aed6g0494 312 MobiDBLite consensus disorder prediction 41 57 - -
Aed6g0494 312 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 267 IPR014476 GO:0003680
Aed6g0494 312 Gene3D - 99 231 - -
Aed6g0494 312 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0494 Aed-Chr6 4279990 4281381 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0494 1 246 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 58.246 6.40e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0494 - - gmx:100807581 373.629