Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0491 ATGCTTGTACACTGTAGTGTGAAGATGTTGGTTAAAATTCACACAAATTGGTTTGTCCCAGTCAGACTACGAGTGCCACACAAGATTGAGTTGAGTAACTGCGTGTTATTCACCACATTTGATAAAGCAAGAACAAGAACAACAACAAATTGGCGTTGTGGTTGTAGTTCAAATCTAAAGGAATGGGAAGTGCAGGAAGCTCGCAGTGCCGTTTCAAGTTATCTCGGAGAATTGGGAGTGTCGGAGGATGATTCGGCGACCATCGCGTCAAACTCACCCGAATACGTGAAGATGTTAGTGGAATGCGTTCACGATTTGGAGCAATGCCAGTGGAACGGGGAAGAACATATAGCGGGGTTAAGCTTCAAAGAAAAAATTCTTCACATCGCAGCTCAAAAAGGAGACAAAGGCAAAGTCGCATACTTAGAGACTCTGGGCTTCACTCTCTCTTCCTCCATGTACATCGCAAGATATCTCTCCTCTCACACTCATACCCTTCCATCTCTCGTACACAAGGTTACCACTATCAAAAAACTCTTCTTTTCCGCTTCTCCCACTTCCCCCAACCATAAAGATGACGACTTTCTTATAAAAAACATTCGCCTCATGATGCGCCACCTCTCTATTCCGATCGATGAAGACCTGCAACACACTCTGTCCTTTTTCGAAAAGCTCCAAGCCAAGCGTGGCGGTCTTAACATTCTGGCTTCAAGAGATTCTGCTTTCCATTACTTAATCGAATCGTTTCCTCGTTTACTTCAGTTATCAGTAGACAATCACTTCACACCGATTCTCCATTCTCTCCACGATTTTGGAATCCCCTCATTTCGCATCTCTAACATAATACTCGCTTTTCCTCCTCTTCTCTTCTGGAATCCTCAACTCCTTCAAACTAGACTCCTCGCCTTCAAGATGGTTCCAAAGAGACAGATAGACTGTGCAATCGAAAGCCACCCTCATCTATTGAGTTGTTCAACAAGCAAGCTGAAGTTGATGGTGGATCAATTTTCTGAACTAGAAGTTCGAAACAAAAAGTTAAATAGGGTTATTGCTAAAAGTCCTCAACTACTATTACGGAAACCCAAAGACTTTCTACAGATTGTTCTGTTGTTTGAAAATATGGATTTTGATAAAGAAACTATCGGAAGAATACTTGCCCGCTGCCCTGAAATTTTCGCTGCAAGCATTAATAAAACTCTACAAAGGAAGATTGAGTTCCTAGGTAGAGTTGGTATTTCTAAAACTTTCCTTCCTGGGGTTATCAGAAAGTATCCGGAATTACTTGTTTCTGACATTGACAAAACTTTACTACAAAGGCTAAGGTACTTGATGAAGTTAGGGCTTTCAGAGAAAGACATTGCATATATGGTAGGTACATTTTCTCCTATCCTTGGATACAGTATAGAGGGGGTTCTTAGGCCAAAAATAGAATTCCTAGTGAACTCAATGGAGAGGCCAGTAAGAGATGTGGTGGGTTACCCTAGGTATTTTAGCTATTCACTAGAGAAGAAGATTAAGCCAAGATATTGGGTGTTGAAAGGAAGGGATATCAAATGTAGCTTAAAAGATATGCTGGGAAAAAATGATGAAGATTTTGCTGCTGAATTTATGGGTATCGGAGAGAATGAAAGATGA 1635 0.4116 MLVHCSVKMLVKIHTNWFVPVRLRVPHKIELSNCVLFTTFDKARTRTTTNWRCGCSSNLKEWEVQEARSAVSSYLGELGVSEDDSATIASNSPEYVKMLVECVHDLEQCQWNGEEHIAGLSFKEKILHIAAQKGDKGKVAYLETLGFTLSSSMYIARYLSSHTHTLPSLVHKVTTIKKLFFSASPTSPNHKDDDFLIKNIRLMMRHLSIPIDEDLQHTLSFFEKLQAKRGGLNILASRDSAFHYLIESFPRLLQLSVDNHFTPILHSLHDFGIPSFRISNIILAFPPLLFWNPQLLQTRLLAFKMVPKRQIDCAIESHPHLLSCSTSKLKLMVDQFSELEVRNKKLNRVIAKSPQLLLRKPKDFLQIVLLFENMDFDKETIGRILARCPEIFAASINKTLQRKIEFLGRVGISKTFLPGVIRKYPELLVSDIDKTLLQRLRYLMKLGLSEKDIAYMVGTFSPILGYSIEGVLRPKIEFLVNSMERPVRDVVGYPRYFSYSLEKKIKPRYWVLKGRDIKCSLKDMLGKNDEDFAAEFMGIGENER 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0491 544 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 219 330 - -
Aed6g0491 544 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 300 357 - -
Aed6g0491 544 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 314 537 - -
Aed6g0491 544 Pfam mTERF 238 533 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 PANTHER CGI-12 PROTEIN-RELATED 219 330 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 PANTHER CGI-12 PROTEIN-RELATED 300 357 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 PANTHER CGI-12 PROTEIN-RELATED 314 537 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 Gene3D Transcription termination factor 3, mitochondrial 327 543 IPR038538 -
Aed6g0491 544 SMART mt_12 487 518 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 SMART mt_12 418 449 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 SMART mt_12 382 413 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 SMART mt_12 312 342 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 SMART mt_12 454 486 IPR003690 GO:0003690|GO:0006355
Aed6g0491 544 SMART mt_12 243 274 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed6g0491 mTERF 9.1e-80 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0491 K15032 - gmx:100802127 788.875