Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0490 ATGGAGGCCAGTGGCGGTGTTAGCGGCGGCGTTACGGTGGTGGGATCGGATGCTCCGTCGGACTACCATGTAGCTCCGAGGACCGACAACCCTTCTCCGGCAGGCGGATCCACGACACAGACTCCGGCGACGGCGGTGAGTGCTCCTCCGCCGCCACTTACGCCGCATACGGCGGCGATGGAGGCGTCTCCGGCGACGATGACGGTGAAGAAGAAGAGGGGGCGGCCGAGAAAGTACGCACCTGACGGGTCCGTGAGCATGGCGCTGTCTCCGAAGCCGATATCTTCCTCCGCTCCGCTGCCGCCGGTGATCGATTTCTCGTCGGAGAAGCGCGGAAAAATAAAACCAACTAATAGCTCCGTGAGCAAAGCCAAATTTGAGTTGGAGAATTTAGGTGAATGGGTTGCATGCTCAGTTGGTGCTAATTTTACTCCCCATATCATCACCGTTAATTCTGGAGAGGATGTTACTATGAAGGTAATATCATTTTCACAGCAAGGGCCTCGAGCTATATGCATTCTTTCAGCTAATGGCGTCATATCAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACATTGACATATGAGGGACGGTTTGAGATTCTGTCTTTATCTGGCTCGTTCATGCCCAATGAAAGTGGAGGAACACGAAGCAGATCTGGTGGCATGAGTGTATCTTTGGCAAGCCCCGATGGACGTGTAGTGGTAGGAAGTTTTCTGGCAGGAAACCAACACGAGCAGAAGCCAAGAAAACAGAAACCTGAGATTATATCAAGTGTGACACCGGCTGCAGTTGTTCCCATCACTACCCTTGACCCAGTACAAATTCTATCAGCAGCGTCTTCCATCCGCGGCGAAAGTTGGCCTGCTATGCCGACAGAGGCCAAGAACAATAAGCCAGCTGACATTAACGTGTCGCTTCCTGCAGGATAA 939 0.5314 MEASGGVSGGVTVVGSDAPSDYHVAPRTDNPSPAGGSTTQTPATAVSAPPPPLTPHTAAMEASPATMTVKKKRGRPRKYAPDGSVSMALSPKPISSSAPLPPVIDFSSEKRGKIKPTNSSVSKAKFELENLGEWVACSVGANFTPHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRSGGMSVSLASPDGRVVVGSFLAGNQHEQKPRKQKPEIISSVTPAAVVPITTLDPVQILSAASSIRGESWPAMPTEAKNNKPADINVSLPAG 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0490 312 Pfam Plants and Prokaryotes Conserved (PCC) domain 145 244 IPR005175 -
Aed6g0490 312 CDD DUF296 144 244 IPR005175 -
Aed6g0490 312 Gene3D - 145 249 - -
Aed6g0490 312 MobiDBLite consensus disorder prediction 290 312 - -
Aed6g0490 312 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 310 - -
Aed6g0490 312 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 244 - -
Aed6g0490 312 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 310 IPR039605 GO:0003680
Aed6g0490 312 MobiDBLite consensus disorder prediction 1 119 - -
Aed6g0490 312 ProSiteProfiles PPC domain profile profile. 140 285 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0490 Aed-Chr6 4237659 4242683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0490 1 309 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.345 4.20e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0490 - - gmx:100801730 509.605