Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0475 ATGGTTACTGCTGCCCTCTCAACCTTGTTTCAAAACCTGAGTCACAACACAACCCAGGTTCTTGTACTGTGTGTCATTTTCACACTTGCTTGGTACGCATGGCTCTACTTTCTCAAACCCAACGCTACTCAGAGCCTTCCACCGGGCCCACCGGGCCTCCCAATCTTCGGGAACCTTCTATCTCTTGATCCGGAGCTTCACAGTTACTTCGCCGGGCTGGCCCAAATCCACGGCCCAATTTTGAAGCTCCAACTCGGGAGCAAACTCAGCATCGTGTTGACTTCACCGGCCATGGCTCGCGAGGTGCTCAAAGACAACGACACCGTTTTCGCGAACCGCGACGTCCCCGCCGCCGGGAGGGCCGCGACCTACGGCGGCTCCGACATAGCGTGGAGCCCGTACGGAGCCGAGTGGCGGATGCTGCGGAAAGTGTGCGTGCTGAAGATGCTGAGCCACGCCACCCTGGACTCCGTGTACGATCTGCGCCGCAACGAGATGCGCAAAACGGTGGCGTTTCTGAGCAGTCGAGTGGGGAGTCCCGTGAAAGTGGGGGAGGAGGTGTTTCTGACGGTGCTGAATGTGATAACGAACATGATGTGGGGCACGGCGGTGGAAGGGGCGGAGAGGGAAAGCTTGGGGGCGGAGTTCAGGGAGCTGGTGACGGAGATAACGCATCTTCTCGGGAAGCCGAACGTGTCGGATTTTTTTCCCGGGTTGGGGTGGTTCGATTTGCAAGGTGTTGTGAGAGAGATGCAGAGGTTGGTGTCACGGTTGGATGAGATATTTGAACGGATAATTGGTGAGAGAATGAAGGTTGAAGGGCAAGATGGGAAGAGGAAAGAAAAAGAAAAAGAAAAAGAAAGGAAGGATTTTATGCAGTTTTTGTTGGACTTGAAGGAGGAAGGCGGAGATGCCAAGACACCACTTACCATCACCCACGTTAAGGCACTGCTAATGAAGGAAAAAACTCTGAAAAGTGAAAAGGACATGGTTACCGGGGGAACTGACACATCCTCCAACACAATTGAGTTTGCAATAGCAGAAATGATGCACAATCCAGAGGTAATGAAGAGAGTCCAAGAAGAGTTGGAAGCTGTAATTGGGAAAGATAACATGGTAGAAGAGTCCCACATTCATAAGTTGTCATACTTGCAAGCTGTTATGAAAGAAACTCTTAGATTACACCCTGTGCTTCCACTTCTAATTCCTCATTGCCCTAGTGAAACCACCAATGTTGGAGGCTACACAATTCCAAAGGGGTCTCGGGTGTTCGTGAATGTGTGGGCTATTCACAGAGACCCTTCAGTTTGGGAGAAACCACTTGAATTTGATCCTACGAGGTTCCTAGATGCAAAATGGGATTTCAGTGGCAATGACTTCAATTATTTCCCATTTGGATCTGGAAGAAGAATTTGTGCAGGAATAGCAATGGCTGAGAGGACTGTTTTGTATTTTCTTGCCACACTTCTGCACTTATTTGATTGGACAGTACCTCAGGGTGAAATATTAGATGTATCAGAGAAATTTGGTATTGTTCTCAAAAAGAAAATTCCTCTTGTCGCCATTCCCACCCCAAGGTTCTCCAACCCAGATCTTTATAATTGA 1605 0.4935 MVTAALSTLFQNLSHNTTQVLVLCVIFTLAWYAWLYFLKPNATQSLPPGPPGLPIFGNLLSLDPELHSYFAGLAQIHGPILKLQLGSKLSIVLTSPAMAREVLKDNDTVFANRDVPAAGRAATYGGSDIAWSPYGAEWRMLRKVCVLKMLSHATLDSVYDLRRNEMRKTVAFLSSRVGSPVKVGEEVFLTVLNVITNMMWGTAVEGAERESLGAEFRELVTEITHLLGKPNVSDFFPGLGWFDLQGVVREMQRLVSRLDEIFERIIGERMKVEGQDGKRKEKEKEKERKDFMQFLLDLKEEGGDAKTPLTITHVKALLMKEKTLKSEKDMVTGGTDTSSNTIEFAIAEMMHNPEVMKRVQEELEAVIGKDNMVEESHIHKLSYLQAVMKETLRLHPVLPLLIPHCPSETTNVGGYTIPKGSRVFVNVWAIHRDPSVWEKPLEFDPTRFLDAKWDFSGNDFNYFPFGSGRRICAGIAMAERTVLYFLATLLHLFDWTVPQGEILDVSEKFGIVLKKKIPLVAIPTPRFSNPDLYN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0475 534 PANTHER OS08G0547900 PROTEIN 11 534 - -
Aed6g0475 534 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 11 534 - -
Aed6g0475 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Aed6g0475 534 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 SUPERFAMILY Cytochrome P450 47 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 Gene3D Cytochrome P450 38 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 Pfam Cytochrome P450 47 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0475 534 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0475 Aed-Chr6 4098633 4100957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0475 4 533 Cytochrome P450 AT4G12300 58.318 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0475 - - gmx:100787507 848.966