Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0470 ATGGGAAGGCAACCCTGCTGTGACAAACTTGGGGTGAAGAAAGGTCCATGGACTGCTGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACCAATGGCCAGTGGTCCAAGATTGCTGCCAGGTTACCCGGAAGAACAGACAATGAGATTAAAAACCATTGGAACACACATATCAAGAAAAAACTCCTCAAGATGGGTATTGATCCTGTTACTCATGAACCTCTCAATAAACAAGCAGCATCTCAGGATAGTTCATCCTCCCCTGCAGAACATTTGCCACAACCTGGCAATAAAAATAATCAGGTGAAGGAAACTGATGGGGTTGTTCTTCTTCTGGACTCACAGGAGAATTCAAGTTCATCACAAGCTGAAAACTCTTCTTCTGGAGATGATTCTTCTCTATTGCTAGATAGCATTTGCAGTGCTGATGAGTACTCTCTATTAAATAGCATGTGGCTGGATGAAACTCCTCTGGTGGAGGCGATATGGGACACAACAACAACACCTAACCTAGAGAATATTACTAACAATAACAACAACACGGGTTTGTTGCCATCTTGCTGGGAGGATAATTGTGCTTGGTTATTGGACTGTCAAGACTTTGGTATTCATGATTTTGGGTTTAACAACTGTTTCAACGAGTTAGAGTCAAATGCACTGCAAACTACTATAGCAATGAAGGAAGAAGAGGGGCATTCATTAATTAACACGCATAATGCAGTAGTACGTACTACGTAG 738 0.4201 MGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKQAASQDSSSSPAEHLPQPGNKNNQVKETDGVVLLLDSQENSSSSQAENSSSGDDSSLLLDSICSADEYSLLNSMWLDETPLVEAIWDTTTTPNLENITNNNNNTGLLPSCWEDNCAWLLDCQDFGIHDFGFNNCFNELESNALQTTIAMKEEEGHSLINTHNAVVRTT 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0470 245 PANTHER PROTEIN ODORANT1-LIKE 2 34 - -
Aed6g0470 245 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 34 - -
Aed6g0470 245 SMART sant 13 60 IPR001005 -
Aed6g0470 245 Gene3D - 12 64 - -
Aed6g0470 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aed6g0470 245 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 34 215 - -
Aed6g0470 245 Pfam Myb-like DNA-binding domain 14 57 IPR001005 -
Aed6g0470 245 PANTHER PROTEIN ODORANT1-LIKE 34 215 - -
Aed6g0470 245 SUPERFAMILY Homeodomain-like 3 67 IPR009057 -
Aed6g0470 245 MobiDBLite consensus disorder prediction 76 101 - -
Aed6g0470 245 ProSiteProfiles Myb-like domain profile. 9 58 IPR001005 -
Aed6g0470 245 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0470 Aed-Chr6 4076175 4078371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0470 1 208 MYB Transcription Factor Family AT4G22680 37.868 3.23e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed6g0470 Myb_DNA-binding 3.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0470 K09422 - gmx:100786965 258.455