Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0468 ATGCTGCATCCCCAAACCACAAACACCCCACAATTCCTGGGGCTGCAGAAACAAACAGGATTATGGAAAGAATCAAACTTTGGAAAGGGAGTAATAATTGGAGTGCTGGATTCCGGAATCACGCCAGACCATCCTTCATTCAGCGATGCAGGAATGCCGCCGCCGCCATCCAAATGGAAAGGGAGATGCGAAATCAATGCGACAGCCTGTAACAAGAAGCTAATCGGAGTGAGGGCCTTCAACGCCGCGGCGAGGATGATCAAAAGAGCAGAGACGGCGATCGATGAGATCGGACATGGGACTCACACAGCAAGCACGGCTGGCGGTGCTTTTGTTGATAATGCAGAAGTGCTTGGAAATGCCAAAGGCACAGCAGCAGGGATTGCCCCTTATGCTCACCTGGCGATGTACAAAGTATGCTTTGGAAGAGGCTGCTACGAGACTGACATATTGGCTGGATTGGATGCAGCTGTGGAGGATGGCGTGGATGTGTTATCGCTATCCCTCGGCCACGATATGCCGAAACTTTTTTTCGATGACAGCGTTGCAATAGGCACTTTTGCAGCAATGCAGAAGGGAATCTTTGTGAGCTGTGCAGCAGGAAACTCTGGCCCTTCCCCCGCCTCCATGATTAACGGAGCGCCGTGGATCCTCACAGTTGGAGCGAGCAGTTTGGACAGAAGGATCGTGGCCACGGCGAAGCTCGGAAACGGGGAAGAATTCGATGGCGAAACTGTTTTCCATCCTTCTGGTTTTTCTTCTGCAGCACTACTACCATTGGCATATGCTGGAAACAATGGAAAACAAGAAGCTGCTTTTTGTACTAGTGGATCATTGAACGGTGTTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGCTATATCAAGAATCGAGATAGGAGAGGAAGTAAAGAGAGCTGGTGGCGCAGCCTTGATTATCATGAATGACGAAAGAAATGGCTTTAGTCTCTTTGCTGATGTACATGTTCTTCCTGCAACACATGTAAGCTATGAAGCTGGAGTTAAGATCAAAGCGTACATAGATTCAACTGCAACACCTACAGCAACGATTTTGTTCAAGGGAACTGTAATTGGAAACTCCGTAGCTCCTTCTGTTGCATCGTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTTTGAAACCAGACATCATAGGACCAGGCCAGAACATCCTAGCTGCATGGCCATTCCCGATAAACAACATTAACAACACCAATTCAATATCCAATTTCAACATCGTGTCCGGCACATCAATGTCATGCCCGCATCTCAGCGGCGTGGCGGCGTTGCTCAAAAGCTCTCATCCTCAATGGTCACCAGCCGCTATAAAATCTGCCATCATGACTTCTGCAGACATAATCAATCTTGAACAGAAACTCATTGTCGATGAAACTCTCCACCCTGCGAATGTCTTCGCCACGGGTTCTGGTCATGTGAATCCATCTAGAGCAAATGACCCTGGCTTGGTTTATGACATCGAGCCTGATGATTATATACCTTATCTCTGTGGTTTAGGCTACAGCGATACACTTGTTGGGATCATTGCATACAGAACAATTAAGTGCTCCGAGACTTCAAGCATTCCCGAAGGAGGGCTCAACTATCCCTCATTTTCTGCTGAGCTTGGTTCCCCGCAGACATTCACAAGGACTGTGACAAATGTTGGTGAGGCAAACTCGTCTTATGTTGTCGTGGTTAATGCACCAGATGGGGTTGATGTTAAGGTCCAACCTAATAAACTTTATTTTTCAGAAGCAAATCAGAAAGAGACATATTCAGTTTCATTCAGTCGTATAGAGTCAGGTGATGAAACTGCAGAGTATGCTCAAGGGTTTTTACAATGGGTCTCTGAGAAGCACACTGTAAGGAGTCCTATGTTGGTCAAATTTGTGTGA 1929 0.4707 MLHPQTTNTPQFLGLQKQTGLWKESNFGKGVIIGVLDSGITPDHPSFSDAGMPPPPSKWKGRCEINATACNKKLIGVRAFNAAARMIKRAETAIDEIGHGTHTASTAGGAFVDNAEVLGNAKGTAAGIAPYAHLAMYKVCFGRGCYETDILAGLDAAVEDGVDVLSLSLGHDMPKLFFDDSVAIGTFAAMQKGIFVSCAAGNSGPSPASMINGAPWILTVGASSLDRRIVATAKLGNGEEFDGETVFHPSGFSSAALLPLAYAGNNGKQEAAFCTSGSLNGVDFRGKVVLCERGGAISRIEIGEEVKRAGGAALIIMNDERNGFSLFADVHVLPATHVSYEAGVKIKAYIDSTATPTATILFKGTVIGNSVAPSVASFSSRGPNLPSPGILKPDIIGPGQNILAAWPFPINNINNTNSISNFNIVSGTSMSCPHLSGVAALLKSSHPQWSPAAIKSAIMTSADIINLEQKLIVDETLHPANVFATGSGHVNPSRANDPGLVYDIEPDDYIPYLCGLGYSDTLVGIIAYRTIKCSETSSIPEGGLNYPSFSAELGSPQTFTRTVTNVGEANSSYVVVVNAPDGVDVKVQPNKLYFSEANQKETYSVSFSRIESGDETAEYAQGFLQWVSEKHTVRSPMLVKFV 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0468 642 Gene3D - 513 641 - -
Aed6g0468 642 Gene3D Peptidase S8/S53 domain 30 509 IPR036852 GO:0004252|GO:0006508
Aed6g0468 642 ProSiteProfiles Serine proteases, subtilase domain profile. 12 496 - -
Aed6g0468 642 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 2 639 - -
Aed6g0468 642 CDD PA_subtilisin_like 232 360 - -
Aed6g0468 642 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 33 44 IPR023827 -
Aed6g0468 642 Gene3D - 226 368 - -
Aed6g0468 642 CDD Peptidases_S8_3 2 463 IPR034197 -
Aed6g0468 642 Pfam PA domain 266 345 IPR003137 -
Aed6g0468 642 SUPERFAMILY PA domain 268 352 IPR046450 -
Aed6g0468 642 Pfam Subtilase family 28 466 IPR000209 GO:0006508|GO:0008236
Aed6g0468 642 SUPERFAMILY Subtilisin-like 5 500 IPR036852 GO:0004252|GO:0006508
Aed6g0468 642 Pfam Fibronectin type-III domain 544 639 IPR041469 -
Aed6g0468 642 PRINTS Subtilisin serine protease family (S8) signature 95 108 IPR015500 -
Aed6g0468 642 PRINTS Subtilisin serine protease family (S8) signature 28 47 IPR015500 -
Aed6g0468 642 PRINTS Subtilisin serine protease family (S8) signature 426 442 IPR015500 -
Aed6g0468 642 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 639 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0468 Aed-Chr6 4062214 4064142 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0468 1 641 Subtilisin-like Serine Gene Family AT1G04110 47.392 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0468 - - gmx:100782009 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0468 6 4062214 4064142 Aed6g0468 6 4062214 4064142 ECH
Aed6g0468 6 4062214 4064142 Aed11g1673 11 20497623 20499083 PCT