Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0461 ATGAAAGAAGATGAGTTTAACAGATTGTCAAAGGCCACAAGGCGAATTAAGAAAGAGGTGCCTAAGAAACTTTTATTGCCTTGTCTATTGGAATGCTCCAGTATAAACAAAACAGTTGAACGTTATCAAAGGAAGATCAAGGAGCTGGGTGTCACCAACAAAGGAATCCATGAAAATACACAGGAAGGTGATATGGGCATGGGAATGAAGATCGAGCATCTAGAAGATTCAAGAAGGAAGCTTTTGGGAGATGAATTGGATAAATGCAGTACTGATGAGTTACAACAGCTAGAGGACCAGCTCGAACGCAGCTTGGACAAAATTAGGGCAAGAAAGACTCCTAACGTTGAAGAACTCGGTGCTGCTTGTGGTCAGAATCAATTGTTCAGGGAGCGAATCGACAAGCTAAAAGAAGAGGAAAAGTGCTTACTAGAAGTAAATAAACGCTTACGCGAGCAGTATCGGATTGAACGACAGCGTTGTTTGAGTGACCAAGATCATGTGGTACTCGAGACAGAAAAGGAGGGAGAAGAGGTGGAGACGGAGTTATTCATAGGAAGACCTCAGAGAAGAATGCCGTTGAAGTTGAAACCTGCAGCAACACATACAACATACGGCAGTATAAAGACTAAGTGCACGCCTCCAAACAATCATTGA 657 0.4262 MKEDEFNRLSKATRRIKKEVPKKLLLPCLLECSSINKTVERYQRKIKELGVTNKGIHENTQEGDMGMGMKIEHLEDSRRKLLGDELDKCSTDELQQLEDQLERSLDKIRARKTPNVEELGAACGQNQLFRERIDKLKEEEKCLLEVNKRLREQYRIERQRCLSDQDHVVLETEKEGEEVETELFIGRPQRRMPLKLKPAATHTTYGSIKTKCTPPNNH 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0461 218 Coils Coil 91 111 - -
Aed6g0461 218 Pfam K-box region 58 154 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed6g0461 218 ProSiteProfiles K-box domain profile. 57 160 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed6g0461 218 PANTHER - 32 192 - -
Aed6g0461 218 PANTHER MADS BOX PROTEIN 32 192 - -
Aed6g0461 218 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0461 Aed-Chr6 4020599 4029093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0461 30 198 MADS-box Gene Family AT4G22950 42.286 1.88e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0461 - - gmx:100805260 240.736