Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0458 ATGGGGTCGAATCACGGAGAGCACGACGAGATGGATCAAGACGACGACGGAGGAGGAACAACGGACCTCAGCACCAGCGACGCCGACGTGGCAGAGAAACAAAGCATCATCGCGTTCGAAGAAACAACAACGGGGTTTCAAGTCTTGCCGCTGAAAAAGGAAGAGCCAACCGATTCTGACCCTGACATAGGGATGGCGGCGATGCAGGTTCCTATTACCGTGCCTGCTGTCAAACCGGCGAGGCGCTCCTCCACGAAAGACCGCCACACCAAAGTGGAAGGGCGCGGCCGCAGGATCCGAATACCCGCCACCTGCGCCGCCCGGATCTTCCAACTGACCCGAGAGCTAGGCCACAAGTCCGACGGCGAGACCGTGCGGTGGCTCCTGGAGCACGCGGAGGAGGCCATCATCGAGGCCACCGGCACCGGCACGGTTCCGGCAATCGCGGTGTCAGTCGGCGGGACGCTGAAAATCCCGACGACGCCATCGAGCGAGGACAAGAAGCGGAAACGGCCATCCAACAGCGAGTTCGTGGACATAAACGAGGGCGCTGTTTCGCAGTCGTCCGGTCTGGCCCCGGTTCAAGTGGCGCAGGGGCTGGTCCCGGTCTGGGCCGTGGGTAACCCCAGCATGGTGGTCCCCGCTAACACCTTCTGGATGATCCCGCACCCGCAGGCCGCGACCACGCCCTTGGGCCCCGCAAACCAGCAGCAGCCTCAGATATGGGCCTTATCCCCCTCCGTGTTCAACGTGGCAGCCAGGCCCGTATCGAATATTATTCCAGAAGGCTGGCCCGTTATGGCGGGGTGTAGTAACGCGGTGGGGGCTAAGGTGGCAACCAAGTCCAGCAGCATGGCACCTAGTGTTAGCTCCACTGGGGATTGTAGTAGTAGTGGCAAGCCTCAGATGTTAAGGGATTTTTCTCTCCAAATTTACGATAAACAAGAGTTGCAGTTCTTGGGTACTCACGCGCAGCAGAGTTAG 984 0.6016 MGSNHGEHDEMDQDDDGGGTTDLSTSDADVAEKQSIIAFEETTTGFQVLPLKKEEPTDSDPDIGMAAMQVPITVPAVKPARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEEAIIEATGTGTVPAIAVSVGGTLKIPTTPSSEDKKRKRPSNSEFVDINEGAVSQSSGLAPVQVAQGLVPVWAVGNPSMVVPANTFWMIPHPQAATTPLGPANQQQPQIWALSPSVFNVAARPVSNIIPEGWPVMAGCSNAVGAKVATKSSSMAPSVSSTGDCSSSGKPQMLRDFSLQIYDKQELQFLGTHAQQS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0458 327 MobiDBLite consensus disorder prediction 18 39 - -
Aed6g0458 327 MobiDBLite consensus disorder prediction 72 94 - -
Aed6g0458 327 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 325 IPR005333 GO:0003700
Aed6g0458 327 MobiDBLite consensus disorder prediction 162 176 - -
Aed6g0458 327 Pfam TCP family transcription factor 84 164 IPR017887 -
Aed6g0458 327 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
Aed6g0458 327 MobiDBLite consensus disorder prediction 155 176 - -
Aed6g0458 327 MobiDBLite consensus disorder prediction 1 39 - -
Aed6g0458 327 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 9 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0458 Aed-Chr6 3992175 3993158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0458 41 327 TCP Transcription Factor Family AT2G45680 44.012 3.30e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aed6g0458 TCP 5.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0458 - - gmx:100781096 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0458 6 3992175 3993158 Aed6g0458 6 3992175 3993158 ECH