Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0444 ATGGGTAGCTGCATATCCGTTGCAGAAGAAGAAGAGCATGATGAGAATGTGACAATATTTGAAGCAAGAAAGGTTCCAAATGGAAGTCAGAGACTTTTTTCTGTTTACTCCAAACAGGGTAGCAAAGGACTCAACCAAGATGCTGCCTCTCTTCACGAGGATGAAGGTCTTGTCATAGCTAATTTGGGTGACTCAAGAGCATTGCTGGGAACAATCTGTGATGAAAAACTCGTAGCCATTCAATTGACCACAGATTTGAAGCCGGAATTACCTCCATGCAGCACCTTCTTCTTCTTTCAGGATATTTTTAACCAAATTAATAAACTAATATTTGCCAATAAAAAAAATCTACTTAATAGTAGAACTCTAGTGTGGGATGTACTAAGCAACAATGAGGTTGCATCAATCGTGTGGAGTGTAGAAAGTGAAGAAGCAGCAGCAAGAGCAGTAGTGGAAGCTGCAACTGCTGCATGGAAAGAGAACTATCCTTCCTATAGGGCAGATGACTGCACGGTGCTTTGCCTCTTCCTGCACAACAAATCACAACAGCTTCTTTGGCCACATATTTGA 570 0.414 MGSCISVAEEEEHDENVTIFEARKVPNGSQRLFSVYSKQGSKGLNQDAASLHEDEGLVIANLGDSRALLGTICDEKLVAIQLTTDLKPELPPCSTFFFFQDIFNQINKLIFANKKNLLNSRTLVWDVLSNNEVASIVWSVESEEAAARAVVEAATAAWKENYPSYRADDCTVLCLFLHNKSQQLLWPHI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0444 189 Gene3D - 123 184 IPR036457 -
Aed6g0444 189 ProSiteProfiles PPM-type phosphatase domain profile. 1 177 IPR001932 -
Aed6g0444 189 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 123 183 - -
Aed6g0444 189 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 56 - -
Aed6g0444 189 PANTHER ALPHABET, ISOFORM E-RELATED 52 91 - -
Aed6g0444 189 PANTHER ALPHABET, ISOFORM E-RELATED 123 183 - -
Aed6g0444 189 SUPERFAMILY PP2C-like 51 179 IPR036457 -
Aed6g0444 189 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 52 91 - -
Aed6g0444 189 PANTHER ALPHABET, ISOFORM E-RELATED 1 56 - -
Aed6g0444 189 Gene3D - 2 92 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0444 Aed-Chr6 3893813 3896355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0444 51 181 PP2C-type Phosphatase Gene Family AT1G79630 34.286 1.01e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0444 - - gmx:100795893 107.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0444 6 3893813 3896355 Aed6g0444 6 3893813 3896355 ECH
Aed6g0444 6 3893813 3896355 Aed4g1628 4 20992086 20993333 PCT