Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0375 ATGAGTTGCAACGGTTGCCGTGTGCTGCGGAAGGGGTGCAGCGACACATGCCCTCTGAAGTCGTGCCTGCAGTGGATCGAATCTCCGGAGTCACAACGACACGCAACTCTGTTCCTCGCTAAGTTCTTTGGCCGTAGCGACCTAATGTCCTTCATTTCCTCCGTTCCCGAAACCAAAAGACCTGCATTGTTTCAGTCTCTGCTATTTGAAGGGTGCGGGCGAACGGTAAATCCGGTGAACGGTGCCGTGGGACTTCTGGGGAGCGGTAACTGGCACGTGTGCCAGGCTGCCGTGGAGACGGTGCTCGCCGGAGGCGCTCTTCATCCGTTGCCGGAGACATTTGCCGGAGATTCCAATGACACGCGCTATCATTTTTGGCCATTAACACTCATGCATAACGTGAGAGAGATGAATGAGAACTCAAGTTTGATGAATAGACCACAAGAATCGGAGATGGCAACTTACGAGGCTCACAAGAAAAATCAGATTTTAAATTTGTTCATGTAA 507 0.5148 MSCNGCRVLRKGCSDTCPLKSCLQWIESPESQRHATLFLAKFFGRSDLMSFISSVPETKRPALFQSLLFEGCGRTVNPVNGAVGLLGSGNWHVCQAAVETVLAGGALHPLPETFAGDSNDTRYHFWPLTLMHNVREMNENSSLMNRPQESEMATYEAHKKNQILNLFM 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0375 168 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Aed6g0375 168 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Aed6g0375 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 116 - -
Aed6g0375 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0375 Aed-Chr6 3228516 3229569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0375 1 116 AS2 family AT3G49940 75.862 8.38e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed6g0375 LOB 2.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0375 - - gmx:100796966 311.997