LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed6g0347	ATGGAAAGTGGACAACCATTCCTTGATTGTCTCTTGCAGAACACTCTCAGAAGCATTTGCTCATATTCCACTTCTCCAACTTCTTCCAAGTGGGAATTTGGAGCGACAGCTCTTGATCGCTCAAAGGGAAATAAAAGAAACTGGCAAGTTTGGATCCTTGTATGGGAAGATGGTTTCTGCGATTTTAATGAATGTGAACAAGGGAGGAGGAGTGGATACTTGAACCACAAGTTTGGACCTGAACTATTCTTCAAAATGTCTCATGAAGTTTATAGTTATGGAGAAGGACTAATGGGGAAAGTGGCCGCAGATAATAATCACAAGTGGGTTTACAGTGACACTCAAAATGGGTGTGAATCTAGCTACATTGGTGCGTGGAATGCTTCAATCGATCATCAACCAAGGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGACTATTGTTGTCATTGCTGTCAGAGAAGGCTTAGTACAACTTGGTTCATTTAACAAGATTGGTGAAGATCTCAATTTAGTCGTCAACATTCAAAGGAAGTTCAACTACCTCCACAGCATACCAGGTGTATTTTCCATTCAAAGACAACACCTACCCCTTCAAAATCCATGCATTGCAAAACCCAATCTACAAATGATGGAAAGCAATGAAATGACTACTCTATCTGCCTATAATGCCAACCAAGTAACAAGAGTACTCAATGGAGTGCATGAGGAAAGATCCAATTTTTTTTCCATGATAGCCATTAACTTGGGTAGGAATCCACCACCCCAGAATGGAACAATAAATGTTCTTTCATACAATCACTCACAAGTTCCTGAAACCAACCATAGAGTGAAGATTGAGGAGTGCAGATTTCATGCTGCTGCTGCTGGAGATCAGAACAAAAAGGCAGGGTGGTCCTAA	903	0.4075	MESGQPFLDCLLQNTLRSICSYSTSPTSSKWEFGATALDRSKGNKRNWQVWILVWEDGFCDFNECEQGRRSGYLNHKFGPELFFKMSHEVYSYGEGLMGKVAADNNHKWVYSDTQNGCESSYIGAWNASIDHQPRTWEFQLNSGIQTIVVIAVREGLVQLGSFNKIGEDLNLVVNIQRKFNYLHSIPGVFSIQRQHLPLQNPCIAKPNLQMMESNEMTTLSAYNANQVTRVLNGVHEERSNFFSMIAINLGRNPPPQNGTINVLSYNHSQVPETNHRVKIEECRFHAAAAGDQNKKAGWS	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed6g0347	300	Pfam	bHLH-MYC and R2R3-MYB transcription factors N-terminal	12	180	IPR025610	-
	Aed6g0347	300	PANTHER	TRANSCRIPTION FACTOR MYC/MYB-RELATED	1	265	-	-
	Aed6g0347	300	PANTHER	TRANSCRIPTION FACTOR MYC/MYB-RELATED	1	265	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed6g0347	Aed-Chr6	3019049	3021148	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed6g0347	85	180	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT2G31280	42.268	1.52e-16	78.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed6g0347	-		-	gmx:100807289	478.404