Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0343 ATGAAGGTGCATCAGTTCGCACGTGGATTAATCTGGGAGCACGAACAACCCTCCCTCACACTTGGGTGCAAACGCTTACGCCCCCTTGCCCCTAAGCTTTCCAACACCGATACTACTGTTACAACAACCTTCGACCTCAAGAGCTTCATCAAACCTGAAAGCGCCTCCACAAAACTTGGAGTTGGATCCTCCGATGATAAGAGAGACCCATCTTCACCTCAGGACCAGGTGGATACAACGCATAATAATATACCAGGAGGGACACGGTGGAATCCGACGCAAGAACAGATAGGGATATTGGAGATGCTGTATAGAGGAGGGATGCGAACTCCGAATGCTCAACAAATAGAGCAGATCACTGCACAGCTTAGCACGTACGGCAAAATCGAAGGGAAGAACGTCTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAGCGTAACAACCTAGCTGCCATTATTCCTCACACTCCTCGTAGTACTCCAAACACAATACTGTCATCACCCCCCTTTAGTAATTGTAGTGGTGAAGTAGTAGAAAGAGAAGAGGAAAATAGCCCGCTGAAGAAGTGTAGGAACTGGGCATTTGAGTACTTGGAAGAGGAAGAAGAACAACATAGAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 672 0.4762 MKVHQFARGLIWEHEQPSLTLGCKRLRPLAPKLSNTDTTVTTTFDLKSFIKPESASTKLGVGSSDDKRDPSSPQDQVDTTHNNIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLSTYGKIEGKNVFYWFQNHKARERQKQKRNNLAAIIPHTPRSTPNTILSSPPFSNCSGEVVEREEENSPLKKCRNWAFEYLEEEEEQHRTLELFPLHPEGR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0343 223 CDD homeodomain 88 149 IPR001356 GO:0003677
Aed6g0343 223 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 223 - -
Aed6g0343 223 Pfam Homeodomain 88 147 IPR001356 GO:0003677
Aed6g0343 223 SUPERFAMILY Homeodomain-like 87 153 IPR009057 -
Aed6g0343 223 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 223 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Aed6g0343 223 SMART HOX_1 85 152 IPR001356 GO:0003677
Aed6g0343 223 Gene3D - 87 155 - -
Aed6g0343 223 MobiDBLite consensus disorder prediction 56 92 - -
Aed6g0343 223 MobiDBLite consensus disorder prediction 75 92 - -
Aed6g0343 223 ProSiteProfiles 'Homeobox' domain profile. 93 148 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0343 Aed-Chr6 2971410 2972491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0343 1 157 Wox Gene Family AT1G46480 60.355 3.15e-60 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed6g0343 Homeodomain 5.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0343 - - gmx:100500674 332.028