Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0342 ATGCTGATAAAGCCAAAGGTATGGAGTTTTGTGTGTTTTGTTTCATCTGTTGTTGGGCTTCTCTGTTACGGTCTCAGCTCCTCTTTCAACCATTTATTTGGAAACTGGACCTGGTGGAAGATATTACTTTATACCCTCTTCAGTTTAATCATCTGTGTTTCTGTCTTATTCGCTAATGCATGGGAGCGTTCCAGCAGTACCTCTACCTGGCTGGAACCTCACATGGCCTTCTTGATTTTGCTCCTTACCTCTGTATACTCCTTTTTCTTCGACAAAGACGTCAAAGGAAAACCCGATGCATATACCCTATTTTCCAGCGCTGCATTTGCTATCATGTCCCTAGGTTTGTCAAGACTGAATCACTTTGGATTTGAGGTTGATCTCTTATATTTTTTCAGCGGCGTTCTAACCGTACAACTCATGAAAATAAAAATATGGTTAGTCATCGTTGGTGGGAGTTTCAGTTATTCTCTCATCCTTCTTCGTTCTTCTCTGGGTGCTTCACCAAGACTAGGCTATCATGGACTACAAGTCGGAGATGATGTAGTCATTGAAATTGGTTCACATTCACAAGGAACCACTCACAGTGCTTCTCAAATGGATTCACTTCAAGCTATTGTTACTGATGCTCGTCTTATGGACAATAGTCACAGTGATAATAACAGCATCATGGCACGGTTCATGGGTTGCATAGAGGCGCTCAAGAAGGAAAACGAGAACCTTATGGACACAGTTTCCAAACATGTCGGCAAATACCTTAAAGCTGTTGTTTTACACGATGAGGACCAGATTCATGTTGATGCCGATGATAACTTGGTGGTCGATGCGTTGTTGCCGTCGGGAATTATCAACGACCTCCGTGAAACCGTGAGGCTGATGGTGGCAGCAGGGTTGAAGGTGAAATGCTGCAGAGCGTACCGTAGCAGTCGCAGGAAATTCCTGAGAAAAAGTGTATCGACATTCTGGTTGCGAATGCAGGAAGAGCTCAACGTGGAGGAGGAGGACATTGACAAGATGGTGGAGATTCAGTGTTGGATAAAAGTTTTGAACCTAGCTGCGGTGATACTCTTTCCCAATGAAAGGACACTATGCGATCGTGTCTTTGAAGGGTCCATTATTTCTTCTTCGGAGAAGTACCATGTATCACTCGGACATGATGCGCTCTGGGTTCGCAAGAGTTTGAACATGTTCATCAACATGGTATCAACCCAGAGCGCATCTTCTCCCAGTGATAAGGAGCAATCCACTGTTATTATTGCCAATAGTGTGTTGGAGTATTATATGATGAGGATGAATTGGAAAAAACATTCACCTTTGTTTGTGGAAGCAGACAGGATAATAATAACGGAGCTGTTAGAGAGTAGTTTGGAAGCCACCTCCAAAATTTACAATGACCCAACTTTGGGTTATGTTTTCATGATGAATAATTGGAGGCTAATAGAACTAGCGGCAACACGATCTATATTGAAACCTATTTTAGGCGACTATTGGTTCCAAAAAAGCACAACAAAGTTCCAACAAAACCTTGAACTCTATCGGAGCTCGTGGAATAAGATTGTAGACATTTTGAAGGTCGTGGACATCGATGATGAGTTAGAATCTAATATTATTGCGGCCGAAGTTATAATAATGAAAGACAAACTCCATTCCTTCAACGAACACTTCGAAGAGATATGCAACGTTCAGTCTACGTGGTTTGTCTTGGACGGGGAGCTAAGGGAACAGATAATAAAATCCGTAGAGAACATGTTGTTGCCAGCATATGGAAACTTCCTTGGGAGGTTTCAGGATTTTCTTGGTAAGCACGCTTATGAGTACATTAAGTATGGAACGTTTGACGTCCAATATCGACTCAATGATAATTTGTTTCTTATATGGATCTCGGAAGAGAAAGAAAGGATACTCGTCCGGTTTGTGTAG 1920 0.4214 MLIKPKVWSFVCFVSSVVGLLCYGLSSSFNHLFGNWTWWKILLYTLFSLIICVSVLFANAWERSSSTSTWLEPHMAFLILLLTSVYSFFFDKDVKGKPDAYTLFSSAAFAIMSLGLSRLNHFGFEVDLLYFFSGVLTVQLMKIKIWLVIVGGSFSYSLILLRSSLGASPRLGYHGLQVGDDVVIEIGSHSQGTTHSASQMDSLQAIVTDARLMDNSHSDNNSIMARFMGCIEALKKENENLMDTVSKHVGKYLKAVVLHDEDQIHVDADDNLVVDALLPSGIINDLRETVRLMVAAGLKVKCCRAYRSSRRKFLRKSVSTFWLRMQEELNVEEEDIDKMVEIQCWIKVLNLAAVILFPNERTLCDRVFEGSIISSSEKYHVSLGHDALWVRKSLNMFINMVSTQSASSPSDKEQSTVIIANSVLEYYMMRMNWKKHSPLFVEADRIIITELLESSLEATSKIYNDPTLGYVFMMNNWRLIELAATRSILKPILGDYWFQKSTTKFQQNLELYRSSWNKIVDILKVVDIDDELESNIIAAEVIIMKDKLHSFNEHFEEICNVQSTWFVLDGELREQIIKSVENMLLPAYGNFLGRFQDFLGKHAYEYIKYGTFDVQYRLNDNLFLIWISEEKERILVRFV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0342 639 Pfam Exo70 exocyst complex subunit 448 620 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed6g0342 639 PANTHER PROTEIN, PUTATIVE-RELATED 7 624 - -
Aed6g0342 639 Gene3D Exocyst complex component Exo70 434 620 - -
Aed6g0342 639 Gene3D Exocyst complex component Exo70 179 413 - -
Aed6g0342 639 SUPERFAMILY Cullin repeat-like 232 620 IPR016159 -
Aed6g0342 639 Coils Coil 231 251 - -
Aed6g0342 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 624 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0342 Aed-Chr6 2961020 2962939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0342 448 620 EXO70 exocyst subunit family AT5G58430 45.455 3.14e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0342 - - gmx:100788390 854.744