Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0334 ATGCCTGCAAAATTGTTGCTCACAACTTTGTACATCTACATCCTCTTGGTGTCTCTTCCTATCCACATGTCACCACATGATGTTAACATAGTCACACACAATTTCAAAAGTAGTAGGAGCAAAATTGGTGGTGCTGGCTCAGCCAAAGGTTGCAACAACAACAAAAAATTGGACTCTAACACAACACCATGTCAAAAACCAACTAGCATTCAAGCAGTTCCTGCAGCTTCACCTCCCCTTGTGTTTTCAGACCAAAGGCTTGAAGCAGTGTACTCAACAATCCAAAAATTCAAGTCCACCATCACATCAGATCCACTAGGAGTGACCAAAACATGGGTTGGATCAGATATATGCAGCTACAGAGGCTTCTACTGTGACACCCCACCAGACAATAGTTCTGCCACTGCTTTGGCCTCTATTGACTTCAATGGCTTCCAACTATCTGCTCCAACCCTTGATGGCTTCATTGATAACCTTCCAGATATTGCTCTCTTCCATGCAAATTTCAACAACTTTGGTGGCACAATCACACCCCAAATAGCCAAACTTTCTTACCTCTATGAGGTTGATCTCAGCACCAACCAATTATCAGGTCCATTTCCTAGTGCTGTTCTAGGCATGAGCACTTTAACATTCTTGGACTTGAGGTTCAATTTTTTCTCTGGGGCAGTTCCACCTCAAATTTTCACACAAAACCTCCAAGTACTTTTCATAAACAACAACATCTTCACTCAAGGATTGCCTGATAACTTAGACTCAACTCATATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCAATCCCAAGGAGTCTTCCTAAGGCTTTGGCCACTCTGAGTGAAGTGCTTTTACTCAACAACCAGTTAACCGGTTGTTTGCCTTATGAGATTGGTTTACTTGAAGAGGCCACAGTGTTTGATGCTGGCAACAACCAGTTAACTGGTCCTTTGCCTTTGTCTTTGAGTTGTCTTGAGAAAGTGGAGGTGCTCAATTTAGGTGGTAATCTGTTGTATGGCATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGGGAACTTGGTCAATTTTTCATTGACAGATAACTATTTCACAGTTGTGGGGCCATTGTGTAGGATTCTGATTCAGAGAGGGGTTCTTGATGTTAGGAAAAATTGTATTCATGATCTTCCCTTTCAGAGATCAGTGATGGAGTGTGCTCAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATGTGGTTTCATGGTCTCATCCCTTGTAAGCTTCCTTTTCAACATTCCATTCCTTAA 1290 0.4264 MPAKLLLTTLYIYILLVSLPIHMSPHDVNIVTHNFKSSRSKIGGAGSAKGCNNNKKLDSNTTPCQKPTSIQAVPAASPPLVFSDQRLEAVYSTIQKFKSTITSDPLGVTKTWVGSDICSYRGFYCDTPPDNSSATALASIDFNGFQLSAPTLDGFIDNLPDIALFHANFNNFGGTITPQIAKLSYLYEVDLSTNQLSGPFPSAVLGMSTLTFLDLRFNFFSGAVPPQIFTQNLQVLFINNNIFTQGLPDNLDSTHILLLTLANNKFMGPIPRSLPKALATLSEVLLLNNQLTGCLPYEIGLLEEATVFDAGNNQLTGPLPLSLSCLEKVEVLNLGGNLLYGMVPEVVCAGLGNLVNFSLTDNYFTVVGPLCRILIQRGVLDVRKNCIHDLPFQRSVMECAQFFATPRMCPFMWFHGLIPCKLPFQHSIP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0334 429 Gene3D Ribonuclease Inhibitor 91 256 IPR032675 -
Aed6g0334 429 PANTHER BNAA09G53810D PROTEIN 11 427 - -
Aed6g0334 429 MobiDBLite consensus disorder prediction 52 69 - -
Aed6g0334 429 MobiDBLite consensus disorder prediction 42 69 - -
Aed6g0334 429 Gene3D Ribonuclease Inhibitor 257 399 IPR032675 -
Aed6g0334 429 SUPERFAMILY L domain-like 95 388 - -
Aed6g0334 429 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0334 Aed-Chr6 2903347 2904636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0334 78 406 Leucine-rich Repeat extension Gene Families AT3G24480 41.641 7.72e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0334 - - gmx:100808707 770.77