Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0333 ATGGCTGTGAGCGACGGCAACGCGATTGCGGTGCAGGAAGCAGCCTCTGCGGGCATTCACAGCGTAGAGAAACTCGTGAACATGATTTTGAATCAGCATCAGCAGCAGAAGGGTGGTTCTGAATTGGAAGCCGTCGCTGACGTGGCGGTGAATCGCTTCAGAGAGGTTATTTCGCTCCTTGAGAAACCGGCTAGAACCGGTCACGCTCGTTTCCGAAGGGCACCTGTCCCTTCAACAACACTGCCACCTGTCCCTGTTGTTCACTTGCAGCAGCAAATAGTGGTCGTCGATGATTCCAAACAGAAAAAGACGACAGAACAAACCTCTGCTTTTAAGGTTTATTGCCCCCCTCCTCCTCCTCCTCTACCTAAGAATGAAACTTCCACCAACTCCTATTTCTCTACGTTAACTGGGGAAACAGAAAGTTTGCAACGGTCACTGCAAGGGGGTGGTTCTTTTATGCGTAAACCGCCACTGTCTTCGAATTCTAAGAGGAAGTGCAATTCAACGGGTTTTCCTGATGTCAAGTGCGTATCTTCTTCCTCTGCGCAGCAGTGTCATTGCTCCAAGAAAAGGAAATTGAGGTTGAAGAGAGTGATTAGAGTGCCCGCTCTTAGTTCCAAGACTGCTGATATCCCACCTGATGAATATTCATGGAGGAAATATGGACAGAAACCAATCAAAGGCTCTCCACATCCTAGAGGTTATTACAAGTGCACCAGCGTGAGAGGTTGCCCTGCACGAAAACATGTGGAGCGTGCTATGGACGATTCCAGCATGCTCGTTGTCACCTACGAAGGAGAACATAATCACTCGCAAATCGCTTCTGAGCTGCCAAATGTCATCCTTGAATCATCTTAA 861 0.4855 MAVSDGNAIAVQEAASAGIHSVEKLVNMILNQHQQQKGGSELEAVADVAVNRFREVISLLEKPARTGHARFRRAPVPSTTLPPVPVVHLQQQIVVVDDSKQKKTTEQTSAFKVYCPPPPPPLPKNETSTNSYFSTLTGETESLQRSLQGGGSFMRKPPLSSNSKRKCNSTGFPDVKCVSSSSAQQCHCSKKRKLRLKRVIRVPALSSKTADIPPDEYSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAMDDSSMLVVTYEGEHNHSQIASELPNVILESS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0333 286 MobiDBLite consensus disorder prediction 147 166 - -
Aed6g0333 286 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g0333 286 Gene3D WRKY domain 200 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g0333 286 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g0333 286 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 77 286 IPR044810 GO:0003700
Aed6g0333 286 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 95 IPR044810 GO:0003700
Aed6g0333 286 Pfam WRKY DNA -binding domain 215 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed6g0333 286 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 77 286 - -
Aed6g0333 286 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 8 95 - -
Aed6g0333 286 SUPERFAMILY WRKY DNA-binding domain 209 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed6g0333 286 Pfam Plant zinc cluster domain 164 211 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0333 Aed-Chr6 2899584 2901434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0333 7 273 WRKY Transcription Factor Family AT2G24570 42.574 1.82e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed6g0333 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0333 - - gmx:100786245 396.741