Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0317 ATGTCCTCAATGCTTACAATTCCAAATGAGTTGTGTTGGTTAGATCTCTCTAACTGTGAATCCCTTACAAGCCTTCTTCCATTTGAGTTCGACCTTTCTAAGTTGATATTCCTGAAGAGACTTCTTCTCCATGGTTGCTCAAATTTGGGATATTTCCCCGCAATTGAGGACTCAATGGAAAATCTAGCAGTGCTCTCATTAGACGGAACAGCAATACCAGCCCTTCCTTCATCCCTGTGCCGTTTGGTTGGGTTTGAAGAATTGAGCCTGAGCAGCTGCGTGAGTCTTGAGACTATTCCATCTTCCATTTTGGAACTTAGCAACTGTGAATCACTTGAAACTTTTCCTAGCAGCATTTTCAAATTGAAGTCGAAGAAACTTAATTTGTATGGTTGTTCAATGTTGAGGACCTTCCCAGAGATCCTGGAGCCTGCAGAAACTTTTGCTCACATTGACTTAACAGAAACGGCAATTAAAGAACTACCTTCATCTTTCGGCAATCTGGTCAGGCTTCGAACCCTGCTTCTGGAAATTGAATGCAAAAAGCTTGAATGCATCCCACAGATTCCACCACTTCTAAAGCAACTATTGGCATTTGATTGCACGTCCATTAGAAGAGTGATGTCAAATTCACTTATTTCACCAATGCTCAACAACTTGATCCGGGCATGGCTTAAGATGACCGAGGATGCATATAGGTCTGTGTTCTTTTGTTTTCCAGGGAATGCAGTTCCTCAATGGTTCCCTTTTTGTTGCAAGGGACATTCAGTGACCATAAATCCAAATTCTCCAAAATTTTGCAGTGATGATGACAAGCTCATTGGTTTTGCTTTGTGTGTTGTTTTCCAACTGTCAAACACCAATGATATTGAAGGTAGATATGGTTCTTTTAGGTACAATCTAAGATTTGAATCTGATGATGGCATACACATTCTTCCCAACAATGATGAGTTAAGAAACTATTTCAATTGGAAGGGTCGAGAGAGAATGGTTGATCAAGATCACACATTCGTGTGGAAATATAACTTGGAATCCCCAAGGATGAGCCTTTTGCTCCGTCATGCTCGCAGCTTCACTTTTGAGGTCAACCCATGTGATGATAATGATGATGATGGCTTTCGGTGGTGGCAACATTTCAAATTAGTTGTCAGAAAGTTCAAATCAATTGTTAGAGTAAAAGAATGTGGAATATGCCCCCTTTATACCAAAGAAAAAGATGATGATAGTAATGTTGATGCTGGCATTTCAAATTCAGCTGAATTTGGTGTATCCAACTCTGTCATGGCATTTTCTACATTCTGA 1302 0.4017 MSSMLTIPNELCWLDLSNCESLTSLLPFEFDLSKLIFLKRLLLHGCSNLGYFPAIEDSMENLAVLSLDGTAIPALPSSLCRLVGFEELSLSSCVSLETIPSSILELSNCESLETFPSSIFKLKSKKLNLYGCSMLRTFPEILEPAETFAHIDLTETAIKELPSSFGNLVRLRTLLLEIECKKLECIPQIPPLLKQLLAFDCTSIRRVMSNSLISPMLNNLIRAWLKMTEDAYRSVFFCFPGNAVPQWFPFCCKGHSVTINPNSPKFCSDDDKLIGFALCVVFQLSNTNDIEGRYGSFRYNLRFESDDGIHILPNNDELRNYFNWKGRERMVDQDHTFVWKYNLESPRMSLLLRHARSFTFEVNPCDDNDDDGFRWWQHFKLVVRKFKSIVRVKECGICPLYTKEKDDDSNVDAGISNSAEFGVSNSVMAFSTF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0317 433 PANTHER LEUCINE-RICH REPEAT-CONTAINING 10 104 - -
Aed6g0317 433 PANTHER LEUCINE-RICH REPEAT-CONTAINING 104 188 - -
Aed6g0317 433 Pfam C-JID domain 239 404 IPR045344 -
Aed6g0317 433 SUPERFAMILY L domain-like 7 229 - -
Aed6g0317 433 Gene3D Ribonuclease Inhibitor 1 103 IPR032675 -
Aed6g0317 433 Gene3D Ribonuclease Inhibitor 104 221 IPR032675 -
Aed6g0317 433 PANTHER TMV RESISTANCE PROTEIN N-LIKE 10 104 - -
Aed6g0317 433 PANTHER TMV RESISTANCE PROTEIN N-LIKE 104 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0317 Aed-Chr6 2768551 2770536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0317 104 206 WRKY Transcription Factor Family AT4G12020 36.792 1.34e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0317 - - gmx:100814075 343.584