Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0295 ATGTCAACACTGAACAATCTTTTTGATCTTCCAGAACAGATATGTTACGTACAATGTGGATTCTGTACCACCATTCTGATGGTAAGTGTTCCGTGCAGCAGTTTGTCAATGGTGGTGGCAGTAAAATGCGGACACTGCACAAGCCTCCTTTCTGTTAACATGATGAAAGCTTCTTTTGTCCCTTTTCACCTTTTAGCATCTCTTAGTCATCTTGAGCCAAAAGAAGGTTGTAGTACTTCAGAAGAAGATGCTAACAAGACTTTGAACACATCCATGATGACCTATTCTGATTGTGATGAAGAGGATGTGATTCCAATGAGTAATAATGCTGTGAATAAACCCCCAGAGAAGAGACAGAGAACACCATCAGCTTACAACTGCTTCATCAAAGAAGAGATTAAAAGGTTAAAGGCTGAGAACCCTGACATGGCCCACAAGGAAGCTTTTAGTACAGCAGCAAAAAATTGGGCCAATTTCCCTCCAACTCAGTGCAAAGTAGATGAAGAGAGTTGTAGCCAGACACATCCTGATGCTGAGGTCAATGAAGAAGAAGGTCGAGGTTTCCGTGGAAGAAAGGTCCCAAGGAATTCCATCTTGGAAAGGACACCCTTTGAGTGA 618 0.4223 MSTLNNLFDLPEQICYVQCGFCTTILMVSVPCSSLSMVVAVKCGHCTSLLSVNMMKASFVPFHLLASLSHLEPKEGCSTSEEDANKTLNTSMMTYSDCDEEDVIPMSNNAVNKPPEKRQRTPSAYNCFIKEEIKRLKAENPDMAHKEAFSTAAKNWANFPPTQCKVDEESCSQTHPDAEVNEEEGRGFRGRKVPRNSILERTPFE 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0295 205 MobiDBLite consensus disorder prediction 170 198 - -
Aed6g0295 205 PANTHER AXIAL REGULATOR YABBY 4 1 179 - -
Aed6g0295 205 Pfam YABBY protein 11 164 IPR006780 GO:0007275
Aed6g0295 205 Gene3D High mobility group box domain 106 183 IPR036910 -
Aed6g0295 205 PANTHER PROTEIN YABBY 6-RELATED 1 179 IPR006780 GO:0007275
Aed6g0295 205 SUPERFAMILY HMG-box 108 163 IPR036910 -
Aed6g0295 205 MobiDBLite consensus disorder prediction 166 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0295 Aed-Chr6 2616298 2618196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0295 2 205 C2C2-YABBY Transcription Factor Family AT1G23420 54.626 1.61e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aed6g0295 YABBY 1.3e-61 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0295 K25796 - gmx:100806755 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0295 6 2616298 2618196 Aed6g0295 6 2616298 2618196 ECH