Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0289 ATGGAACATAGTAGTTTGGTTTTCTGGCTACTGGGGTTGCTCCTTCTGCTGTTGATGGAGATTTCTTCTGCTGCTCTTTCTCCTTCTGGCATAAACTATGAAGTTGTTGCTCTGATGGCTATAAAGACTGACATGGTTGATCCTCACAACGTTCTGGAAAATTGGGATAGTAATTCTGTTGATCCATGTAGCTGGAGGATGATCACGTGTTCCTCTGATGGTTTTGTTTCTGCATTGGGATTGCCGAGTCAGAACTTGTCTGGTACACTATCTCCTGGGATTGGAAACCTTACTAACTTACAATCTGTGTTGCTTCAGAATAATGCTATTTCTGGTAGGATTCCTGCTGCGATAGGAAACTTGGAAAAGCTTCAGACACTTGATCTTTCCAATAATGAATTTAGTGGTGAGATACCCAGTTCTGTGGGAGGCCTCAAGAACCTGAATTATTTGAGGTTAAATAATAACAGCCTTTCAGGACCCATCCCTCAGTCTCTTAGCAACATTGAAGGTCTAACCCTTGGGATTATTGGTAACCCTTTAATTTGTGGCCCAAAAGAAAACAACTGTTCTACTGTTTTACCTGAGCCACTTTCCTTCCCTCCAGATGCACTAAAAGGCCAATCAGACTCTGGTAAAAAAAGCCATCATGTGGCACTTGCTTTTGGTGCAAGTTTTGGTGCTGCTTTTGTCCTTGTGATTATAGTTGGGCTTCTCGTTTGGTGGCGGTATAGAAGGAACCAACAGATATTCTTTGATGTCAATGAACATTATGATCCAGAGGTGCGTCTTGGTCATTTAAAAAGGTTTTCATTCAAAGAGCTTCGAGCTGCAACAGACCATTTCAACTCAAAGAACATTCTAGGAAGAGGTGGCTTTGGAATAGTTTACAAGGCATGCTTGAATGATGGGTCTGTTGTGGCTGTCAAAAGGTTAAAGGACTACAATGCAGCCGGTGGTGAGATCCAATTTCAGACTGAAGTTGAGACAATAAGCTTGGCCGTCCACCGGAATCTTCTGAGGCTTTCAGGGTTTTGCAGCACTCAGCACGAAAGGCTCCTTGTTTATCCATACATGTCTAATGGCAGTGTTAAGAAGCTCCACCAGGATGGAAGATTGAGCCAAATGGCAGACAAAGATCTAAAGGGTAACTTTGATCTGATTGAACTAGAAGAAATGGTTCAAGTTGCACTCTTGAGTACACAGTTCAACCCTTTACACCGCCCGAAGATGTCAGAAGTACTAAAGATGTTGGAAGGGGATGGCTTAGCCGAGAGATGGGAGGCCTCACAGTCACAGAGGATTGAAACACCAAGGTTTCGGTCTTGTGAGCCTCAGAGATATTCAGATTTGATAGAGGAATCTTCACTCATAGTTGAAGCCATGGAGCTTTCTGGCCCTAGGTGA 1407 0.4328 MEHSSLVFWLLGLLLLLLMEISSAALSPSGINYEVVALMAIKTDMVDPHNVLENWDSNSVDPCSWRMITCSSDGFVSALGLPSQNLSGTLSPGIGNLTNLQSVLLQNNAISGRIPAAIGNLEKLQTLDLSNNEFSGEIPSSVGGLKNLNYLRLNNNSLSGPIPQSLSNIEGLTLGIIGNPLICGPKENNCSTVLPEPLSFPPDALKGQSDSGKKSHHVALAFGASFGAAFVLVIIVGLLVWWRYRRNQQIFFDVNEHYDPEVRLGHLKRFSFKELRAATDHFNSKNILGRGGFGIVYKACLNDGSVVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLSGFCSTQHERLLVYPYMSNGSVKKLHQDGRLSQMADKDLKGNFDLIELEEMVQVALLSTQFNPLHRPKMSEVLKMLEGDGLAERWEASQSQRIETPRFRSCEPQRYSDLIEESSLIVEAMELSGPR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0289 468 Gene3D Phosphorylase Kinase; domain 1 251 358 - -
Aed6g0289 468 ProSiteProfiles Protein kinase domain profile. 282 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0289 468 SUPERFAMILY L domain-like 32 173 - -
Aed6g0289 468 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Aed6g0289 468 PANTHER PROTEIN NSP-INTERACTING KINASE 3 364 468 - -
Aed6g0289 468 PANTHER PROTEIN NSP-INTERACTING KINASE 3 175 364 - -
Aed6g0289 468 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 174 - -
Aed6g0289 468 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Aed6g0289 468 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Aed6g0289 468 Pfam Protein kinase domain 283 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0289 468 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 174 - -
Aed6g0289 468 SUPERFAMILY Protein kinase-like (PK-like) 258 375 IPR011009 -
Aed6g0289 468 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 364 468 - -
Aed6g0289 468 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 175 364 - -
Aed6g0289 468 Gene3D Ribonuclease Inhibitor 31 199 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0289 Aed-Chr6 2551412 2557249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0289 364 468 Receptor kinase-like Gene Family AT5G16000 58.929 2.86e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aed6g0289 Pkinase 1.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0289 - - gmx:100806943 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0289 6 2551412 2557249 Aed6g0289 6 2551412 2557249 ECH