Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0286 ATGGATGGAATGTACGGAGTGCCACCGGAGTACGCCGACAAGGCTCTCATGACGCCGGAGAATCTGATTTTCCCGCCGGACTACCACGCCTTCCTAGCCGCCTCCCGGATTCCCATGTTCGGATCCGACGAGCTCTTCTCCGCCGAGCCCTCCGCCGGAATTCAACGGCAGGAGCAGCAGGATGACGTGGCAGCCACCACCGTGATGAAGGCCAAAATCGCCTCTCACCCTCACTACCCTCGCCTCCTCCAAGCTTACATCGACTGCCAGAAGGTTGGGGCGCCTCCGGAAATCGCGCGTTTGTTGGAGGAAATCCGGCGAGAAAACGACCTGTGCAAGAGCGAAGAAACCTACTGTGACATGCTGATGAAGTATAAATCCGACTTGGCTCGCCCTTTTGATGAAGCAAGCACCTTCCTCAGCAAGATCGAAATGCAGCTCAGCCATCTCTGCACCGGCGCTTCCGTTTCCACTGTTTCTGATGATGGGGGTGTGTCTTCGGACGAAGATTTGAGTACCGGTGATGGTGATGCTCAAGATGGCCAATTAAAGGGTGAAGATCGTGAGCTCAAGGATAGGCTTTTACGTAAGTTTGGGAGTCACATTGGTACTTTGAAACTCGAGTTTTCTAAGAAGAAAAAGAAGGGTAAGCTTCCCAAGGAAGCAAGACAAACATTGCTTCAATGGTGGAATGTTCACTACAAATGGCCTTACCCTACGAAAACGTCATTGGAAACCATCCGAGAATATGCAGTTTTCTATGATGGAAAATCTTAA 777 0.5135 MDGMYGVPPEYADKALMTPENLIFPPDYHAFLAASRIPMFGSDELFSAEPSAGIQRQEQQDDVAATTVMKAKIASHPHYPRLLQAYIDCQKVGAPPEIARLLEEIRRENDLCKSEETYCDMLMKYKSDLARPFDEASTFLSKIEMQLSHLCTGASVSTVSDDGGVSSDEDLSTGDGDAQDGQLKGEDRELKDRLLRKFGSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPTKTSLETIREYAVFYDGKS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0286 258 ProSiteProfiles ELK domain profile. 189 209 IPR005539 GO:0003677
Aed6g0286 258 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 1 241 - -
Aed6g0286 258 Pfam KNOX1 domain 69 110 IPR005540 GO:0003677|GO:0005634
Aed6g0286 258 Gene3D - 195 250 - -
Aed6g0286 258 Pfam ELK domain 189 210 IPR005539 GO:0003677
Aed6g0286 258 SMART KNOX1_2 67 111 IPR005540 GO:0003677|GO:0005634
Aed6g0286 258 MobiDBLite consensus disorder prediction 159 186 - -
Aed6g0286 258 SMART ELK_2 189 210 IPR005539 GO:0003677
Aed6g0286 258 Pfam KNOX2 domain 116 151 IPR005541 GO:0003677|GO:0005634
Aed6g0286 258 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 241 - -
Aed6g0286 258 SMART KNOX2_2 88 152 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0286 Aed-Chr6 2519736 2527622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0286 1 241 Homeobox Transcription Factor Family AT1G23380 59.712 8.22e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0286 - - gmx:100794719 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0286 6 2519736 2527622 Aed6g0286 6 2519736 2527622 ECH