Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed6g0278 | ATGGCTTCTCTAACTCCACTTCTCTCTCTTCTCCTCACTCTTCTTCTTGCAACAACTTCATGTGTAACCGTGTTTTCTTTAGCAGTTTCAATCAAAACAACTTACTTGGAACCTTTCAAATGCTCCCCTAAGATCACCACATGCAATGCCTTACTCTACCACATAAGCTACGGTGACAACATAGACGACATAGCAACCTCTTACTCTGTTAATGCCTCACAAATGAAACCTATAATTCGTGGTGGAAACAAGCAAGATTACCTCATAACAGTGCCTTGCTCTTGCAACGACACCAATGGCCTTGGCGGGTATTTCTATGAGACAACCTACGACAAGGTGAAGACCAATGACACATTTCTGAATATTAGCAACTTTGTCTACAGTGGCCAAGCATGGCCTATTAATAAAAGAAGATTGGACCCAGATAAGGAGTTAAGAATACATCTTCCTTGTGGGTGTTCAGAGAAAAGTGACTCTCAGATTGTTGTCACTTACACGGTTCAGAGAAATGATACAACTGCATCAATTGCTTCTCTGCTAAATGCTACTTTAGATGGCATGGTGAGTATGAATGAAGTTCTGGCTCAGAATCCCTCATTCATAGATGTTACTTGGGTGTTGTATGTTCCCAGGGAATTGAATGGCTTACCACTTTCCAATGGAAAAGACAAGAAACAAAAGTTGGAGATAATCATTGGCATCTTAGCAGGTGTGACATTACTTTCAGTTATTACCTTGATCATTGTCATTGTCTTTCTTAGGAGATCCAGAGCCATTGGAACTGCCCAAAATGATTCAAGTGCTATCTCTAAAAGATCAATTACCAATAGAACTATTTCCACAAAGAACCGAGACTTTCATACAGAATATATTCAAGATGCACAGACATTTGAGTCAGAAAGACCAGTAATTTATGCTCTAGAGGAGATTGAAGATGCTACAAATAACTTTGATGAAACCCGAAAGATTGGAGTAGGTGGATACGGAAGTGTGTTTTTTGGAATGTTAGAAGAGAAGGAGGTTGCTGTGAAGAAGATGAGGTCTAATAAATCCAAAGAATTCTATGCAGAACTCAAGGCCTTGTGTAAGATTCATCATATTAACATTGTGGAGTTGTTGGGATATGCTAGTGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCAAATGGATCTCTCAGTGAGCATCTTCATGATCCATTACTGAAAGGTATGATAAATGTAGCAGATTTTGGACTTGCAAAGCTAGTAGAAAGAACCAATGACGAAGAATTCATAGCGACGAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCAAGTGACTATAAAAACAGATGTGTTTGCATTTGGTGTGGTTCTGGCAGAGTTGATAACAGGGAAACGTGCACTATTTCGTGACTACCAACAAGCCAACAACATGAGATCACTTGTTACTGTTATGGCAGAAGTAGCTCATTGGTGTTTGTGTGAAGATCCAAATGATAGGCCTGAGATGAGGAAGATTGTTGTGGCATTGTCACAGATTGTGATGTCCTCCACAGAATGGGAAGCATCACTAGGTGGAGACAGAGAGGTCTTCAGTGGGGTACTTGATGGAAGATGA | 1626 | 0.4047 | MASLTPLLSLLLTLLLATTSCVTVFSLAVSIKTTYLEPFKCSPKITTCNALLYHISYGDNIDDIATSYSVNASQMKPIIRGGNKQDYLITVPCSCNDTNGLGGYFYETTYDKVKTNDTFLNISNFVYSGQAWPINKRRLDPDKELRIHLPCGCSEKSDSQIVVTYTVQRNDTTASIASLLNATLDGMVSMNEVLAQNPSFIDVTWVLYVPRELNGLPLSNGKDKKQKLEIIIGILAGVTLLSVITLIIVIVFLRRSRAIGTAQNDSSAISKRSITNRTISTKNRDFHTEYIQDAQTFESERPVIYALEEIEDATNNFDETRKIGVGGYGSVFFGMLEEKEVAVKKMRSNKSKEFYAELKALCKIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLHDPLLKGMINVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVLAELITGKRALFRDYQQANNMRSLVTVMAEVAHWCLCEDPNDRPEMRKIVVALSQIVMSSTEWEASLGGDREVFSGVLDGR | 541 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed6g0278 | 541 | Gene3D | LysM domain | 155 | 214 | IPR036779 | - | |
Aed6g0278 | 541 | PANTHER | LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED | 486 | 541 | - | - | |
Aed6g0278 | 541 | PANTHER | LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED | 19 | 407 | - | - | |
Aed6g0278 | 541 | PANTHER | LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED | 408 | 491 | - | - | |
Aed6g0278 | 541 | ProSiteProfiles | Protein kinase domain profile. | 317 | 518 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed6g0278 | 541 | Gene3D | Phosphorylase Kinase; domain 1 | 294 | 388 | - | - | |
Aed6g0278 | 541 | Pfam | Protein tyrosine and serine/threonine kinase | 320 | 400 | IPR001245 | GO:0004672|GO:0006468 | |
Aed6g0278 | 541 | Gene3D | Transferase(Phosphotransferase) domain 1 | 390 | 530 | - | - | |
Aed6g0278 | 541 | ProSitePatterns | Protein kinases ATP-binding region signature. | 323 | 345 | IPR017441 | GO:0005524 | |
Aed6g0278 | 541 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 486 | 541 | IPR044812 | GO:0019199|GO:0045087 | |
Aed6g0278 | 541 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 19 | 407 | IPR044812 | GO:0019199|GO:0045087 | |
Aed6g0278 | 541 | Pfam | Protein kinase domain | 404 | 509 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed6g0278 | 541 | SUPERFAMILY | LysM domain | 163 | 210 | IPR036779 | - | |
Aed6g0278 | 541 | SUPERFAMILY | Protein kinase-like (PK-like) | 302 | 516 | IPR011009 | - | |
Aed6g0278 | 541 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 408 | 491 | IPR044812 | GO:0019199|GO:0045087 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed6g0278 | Aed-Chr6 | 2431340 | 2435338 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed6g0278 | 297 | 541 | Receptor kinase-like Gene Family | AT1G51940 | 38.671 | 7.14e-67 | 226 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Aed6g0278 | Pkinase | 6.9e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed6g0278 | - | - | gmx:100800907 | 866.685 |