Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0267 ATGCCTCTTCTACTCGCACGCACCCCACCATCCTCACTTCCTCCAATCCCTCTTCGATACGCACGCACGCCACTAATCACGGCCTCTCAGAAGCGCTTCCCTCTCGCCGCAACGCGAATCGTTCTCTTCACTTCCTGGCGGCGCATTCTAGCAGCTCCTACTCATCCGAAGTGCGCCTCCGTCAACGGAGTTTCTGTTCCGAACAATCCAGAAGCTTCCGAAGAACAATTCTATGCTTCCGAGCTTCTCGACAGGATTCGTAAATGGCTCGGGTTTCTACCATCGATTCTTCCCGGCGGACGGTGGTGGGAATTCTCCGATGACGTTGACTTTCAGATGGTGGCGCAGCCGGTGACCGTGTGGCGCGCCCTCGGCAAAATGTGGGACCTTGTCGCGCGTGACAGATGGGTCATCCTCGCTGCATTCTCTGCTCTCACTGTTGCTGCAGTTAAGAGAATGAGAGAAACACTATACTCTTCTCTTCTTCTGCAGGATATATCATTTTTTGACAATGAAACAGTAGGTGATTTGACAAGTAGGCTTGGGGCAGATTGCCAACAAGTGTCAAGGGTTATCGGAAATGATCTTAACTTGATATTGCGCAACGTTCTTCAGGGGGGAGGTTCATTAATCTACTTGTTGATTTTATCTTGGCCACTTGGTTTATCTACATTGGTGGTATGCTCCATATTATCAGCAGTTATGTTACGTTATGGAAGGTACCAGAAAAAGGCAGCAAGGTTGATCCAAGAAGTCACTGCTTCTGCAAATGATGTAGCTCAAGAGACATTCTCTCTTATTAGAACTGTACGAGTGTATGGAACAGAAGAAGAAGAACATGAAAGGTATAATTTTTGGCTGGGGAAATTAGCTGACATAAGCTTGCGACAAAGTGCTGCCTATGGAGTTTGGAATTTTAACTTTAACATGCTTTACCATTCAACTCAGGTTATCGCTGTGCTATTTGGAGGAATGTCTATTCTAGGGGGTCATATCACAGCTGAGAAACTTACAAAGTTTATATTATACAGTGAATGGTTAATTTATTCTACCTGGTGGGTGGGAGACAATATATCCAATTTGATGCAATCGGTTGGGGCTAGTGAAAAAGTATTCCACTTAATGGATCTCTCATGGGTAAAATTGCAGAGGTTAACAGGGCGTATTGAGTTTCTGAATGTATCTTTTCACTATCCTTCAAGGCCAACGGTATCTGTAGTGCAACATGTGAACTTTGTTGTCCATCCTGGTGAGGTGGTTGCAATAGTTGGACTTAGTGGTAGTGGAAAAAGCACATTGGTGAATCTTTTGCTCCGTCTCTATGAGCCTACAAATGGTCAGATTTTGATAGATGATATCCCTCTTAAAGACTTGGACATCAAGTGGTGGAGAGAGAGAATTGGATTTGTGGGCCAGGAACCCAAACTCTTCCGAACGGATATTAGTTCAAACATCAGATATGGATGTACGCAAGATGTAAAGAAGGAGGATATTGAATGGGCTGCAAAGCAAGCCTATGCCCATGATTTTATCTCAGCACTTCCCAATGGTTATGAAACACTTGTTGATGATGATCTGTTAAGTGGAGGACAAAAGCAGCGAATCGCTATTGCTAGGGCCCTTCTTAGGGACCCAAAAATATTGATCCTTGATGAAGCCACTAGTGCACTGGATGCTGAAAGTGAGCATAATGTCAAGGGTGTTCTTCGATCTGTTAGAAGTGATTCTGCAACCAGAAGTGTCATAGTCATTGCACACAGGCTTTCTACCATACAAGCAGCTGACAGGATTGTGGTGATGGATGGTGGTCAAATTGTTGAGATGGGAAGTCACAAGGATCTTCTCTTAAAAGATGGTTTGTATGCACGGTTAATCAGAAAACAGGCTGATGCCATGGCATGA 1902 0.4458 MPLLLARTPPSSLPPIPLRYARTPLITASQKRFPLAATRIVLFTSWRRILAAPTHPKCASVNGVSVPNNPEASEEQFYASELLDRIRKWLGFLPSILPGGRWWEFSDDVDFQMVAQPVTVWRALGKMWDLVARDRWVILAAFSALTVAAVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGSLIYLLILSWPLGLSTLVVCSILSAVMLRYGRYQKKAARLIQEVTASANDVAQETFSLIRTVRVYGTEEEEHERYNFWLGKLADISLRQSAAYGVWNFNFNMLYHSTQVIAVLFGGMSILGGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLSWVKLQRLTGRIEFLNVSFHYPSRPTVSVVQHVNFVVHPGEVVAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDDIPLKDLDIKWWRERIGFVGQEPKLFRTDISSNIRYGCTQDVKKEDIEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARALLRDPKILILDEATSALDAESEHNVKGVLRSVRSDSATRSVIVIAHRLSTIQAADRIVVMDGGQIVEMGSHKDLLLKDGLYARLIRKQADAMA 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0267 633 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 389 627 IPR003439 GO:0005524
Aed6g0267 633 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 135 363 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g0267 633 ProSitePatterns ABC transporters family signature. 527 541 IPR017871 GO:0005524
Aed6g0267 633 Gene3D ABC transporter type 1, transmembrane domain 136 386 IPR036640 GO:0005524|GO:0016021
Aed6g0267 633 Pfam ABC transporter 408 555 IPR003439 GO:0005524
Aed6g0267 633 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 78 150 - -
Aed6g0267 633 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 142 632 - -
Aed6g0267 633 CDD ABC_6TM_TAP 142 371 - -
Aed6g0267 633 PANTHER ABC TRANSPORTER B FAMILY 78 150 - -
Aed6g0267 633 PANTHER ABC TRANSPORTER B FAMILY 142 632 - -
Aed6g0267 633 SUPERFAMILY ABC transporter transmembrane region 138 376 IPR036640 GO:0005524|GO:0016021
Aed6g0267 633 CDD ABC_MTABC3_MDL1_MDL2 389 628 - -
Aed6g0267 633 Pfam ABC transporter transmembrane region 146 348 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed6g0267 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 628 IPR027417 -
Aed6g0267 633 Gene3D - 387 629 IPR027417 -
Aed6g0267 633 SMART AAA_5 416 604 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0267 Aed-Chr6 2360770 2366709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0267 152 631 Calmodulin-binding Proteins AT2G36910 34.205 7.20e-72 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0267 - - gmx:100775951 1080.47