Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0265 ATGTTCGGACCAACCCAACCCGATTCCAAACCTCCAAAGCCCACTCTCAAATTCCTCTGCAGCTACGGCGGTAAAATCCTCCCTCGCTACCCCGACGGCAAGCTCCGCTACCTCGGCGGCCACACCCGCGTCCTCGCCGTTGACCGCTCCATCCCATTCTCCGAGCTACTGCTGAAGCTGGAGGAGCTCTGCGGCGCCTCCGTGAGGCACCTCCGCTGCCAGTTACCCTCCGAAGACCTCGACGCTCTCGTCTCCATCACCTCCGACGAGGATCTCGCAAACCTCATCGAGGAATACGACCGCGTTTCGTCGCTCAAGATCAGAGCTTTCCTCTCGCCACCCACGCCGCCGAGGTCGCCGAAGAAGGTCTCCACTCCTCCGTCGAAATCGGCGTCCGTCTCTTCCTCCTCCGCTTCGTCGTCATCGTCGTCGTCTTCATCGTATTGCAGTCCTACCACCGGCGGCTCTGGCCGGAGGTATATGACTTCGGCAACGGTGTCAGACCGCTGCGTACATCAGATGTCGACGCCGGCGGCGTATACGGCCGGCATGGAGAAGTCGAAATCCTCCGGGAGGAATATTCCTATGCCGCGGTACGGTTACGGCCACCACGGGAACGGTGGTCACGTTTATCTGATCCACAACGGGAACCACTGGCAATAG 663 0.6048 MFGPTQPDSKPPKPTLKFLCSYGGKILPRYPDGKLRYLGGHTRVLAVDRSIPFSELLLKLEELCGASVRHLRCQLPSEDLDALVSITSDEDLANLIEEYDRVSSLKIRAFLSPPTPPRSPKKVSTPPSKSASVSSSSASSSSSSSSSYCSPTTGGSGRRYMTSATVSDRCVHQMSTPAAYTAGMEKSKSSGRNIPMPRYGYGHHGNGGHVYLIHNGNHWQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0265 220 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Aed6g0265 220 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 9 219 - -
Aed6g0265 220 Gene3D - 34 112 - -
Aed6g0265 220 SUPERFAMILY CAD & PB1 domains 32 117 - -
Aed6g0265 220 SMART PB1_new 30 114 IPR000270 GO:0005515
Aed6g0265 220 MobiDBLite consensus disorder prediction 124 160 - -
Aed6g0265 220 MobiDBLite consensus disorder prediction 110 160 - -
Aed6g0265 220 CDD PB1_UP2 19 111 - -
Aed6g0265 220 PANTHER OS05G0427100 PROTEIN-RELATED 9 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0265 Aed-Chr6 2343432 2346824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0265 16 111 MAP Kinase Kinase Kinase AT5G57610 52.475 3.72e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0265 - - gmx:100810685 306.99