Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed6g0256 | ATGGAAGACCAAAGCCAGAGAAAACTCAGAATCCTGTGCCTCCATGGATACAGGACCAGTGGTGAAATCCTCAAGCAATCAGTCCTAAGATGGCCTGAAGCTGTGTTACAAAAGCTGGACCTGGTGTTCCTCGATGCCCAGTTTCCTGCACAGGGAAGATCTGACGACTTCACGTGTACGTATACCAACTTTGAAGAATGTTTAGCATACATTGAAGATTACATGCTGAAAAATGGTCCTTTCGATGGTTTATTAGGTTTCTCTCAGGGAGCAGTTTTAGCCGCTGCATTGCCAGGATTGCAAGCAAAGGGTGTGACACTTGGGAAGGTAAAGAAGATCAAGTTCGTGATTGTGATATCAGCATCCAAGTTTGGTGGAAACTTGTACGGAATGCCAAAACTGGCTTCTAGTGCATATTCAAAACAAATGGACTCTTCACTTTATAGGTACTTTAAAAACACACACAAGTCTCATTTTGCAAGGGAGAAAGATTTTGTAAAGCCAGATAGCATTGCTTTGTTGGAAGCATTCAAGGATCCCGTGGTGATTCACCACCCTAAAGAGCACACAGTTCCTACACTTGATGATAAGAGTCTTCAAATTATGCTCGGTTTCATTGACACAATTCAGAGTAGGATGACCTGTTCAAGACTTCAAATTACTTAA | 666 | 0.4219 | MEDQSQRKLRILCLHGYRTSGEILKQSVLRWPEAVLQKLDLVFLDAQFPAQGRSDDFTCTYTNFEECLAYIEDYMLKNGPFDGLLGFSQGAVLAAALPGLQAKGVTLGKVKKIKFVIVISASKFGGNLYGMPKLASSAYSKQMDSSLYRYFKNTHKSHFAREKDFVKPDSIALLEAFKDPVVIHHPKEHTVPTLDDKSLQIMLGFIDTIQSRMTCSRLQIT | 221 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed6g0256 | 221 | PANTHER | OVARIAN CANCER GENE-2 PROTEIN-RELATED | 1 | 55 | - | - | |
| Aed6g0256 | 221 | PANTHER | OVARIAN CANCER GENE-2 PROTEIN-RELATED | 56 | 212 | - | - | |
| Aed6g0256 | 221 | Pfam | Serine hydrolase (FSH1) | 55 | 197 | IPR005645 | - | |
| Aed6g0256 | 221 | Pfam | Serine hydrolase (FSH1) | 7 | 53 | IPR005645 | - | |
| Aed6g0256 | 221 | PANTHER | ESTERASE AGAP003155 | 1 | 55 | - | - | |
| Aed6g0256 | 221 | Gene3D | alpha/beta hydrolase | 5 | 212 | IPR029058 | - | |
| Aed6g0256 | 221 | SUPERFAMILY | alpha/beta-Hydrolases | 8 | 191 | IPR029058 | - | |
| Aed6g0256 | 221 | PANTHER | ESTERASE AGAP003155 | 56 | 212 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed6g0256 | Aed-Chr6 | 2252807 | 2254540 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed6g0256 | 3 | 124 | Sulfurtransferasese or Rhodanese | AT1G09280 | 31.677 | 5.24e-12 | 62.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed6g0256 | - | - | gmx:100794918 | 283.878 |