Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0250 ATGGCTCACAACTCAAACAGTGCCACATCCAACCTCCTCTGTTCGGAGAACAGCAGCACTTGCTTCGATGATGATGCCGCGGATGGGTCCAGAATCTCGCATTTCTGGGACCACAGAAGGAACGTTTATTCTGAACATCACGAGGGTGGTGTTGGTGGATCGGAGTTGTGGGCGTGTTTTGTGGCGCAGAGTGAGGAAACTGTGAGGGCTATGGTGGAGAGAGAGAGGGAGCATTTGCCGAGGGATGATTACTTGATGAGGCTGAGGACTGGGGACTTGGACTTGGGGGTTAGGAGGGAGGCTCTTGATTGGATTTGGAAGGCTCATTCTTTTTTTGGTTTTGGACCCTTGAGTTTTTGTTTAGCTGTGAACTACTTGGATCGCTTCCTATCAGTTTTCGACTTACCGAAAGGTGTGAGTTGGACTGTGCAATTGTTAGCTGTAGCTTGCTTGTCAATTGCGGCTAAAATGGAGGAAATCAAAGTGCCTCAATCTGTAGATTTACAGGTTGGAGAACAAAAGTTTGTGTTTGAAGCTAGAACCATTCAAAAAATGGAACTACTGGTATTAAGCACATTGAGATGGCAAATGCGGGCTTTAACTCCTTGTTCCTTCATAGACTACTTTCTTGGCAAGATCACCTGTGAGCAGCATCCAGCAAAATCATCCATCTCAATATCCCTGCAGCTCATCCTTGGCTTAATCAGAGGTATCGACTTCTTGGAATTCCAGCCTTCTGAAATTGCAGCCGCGGTGGCAGTTTCTGTTCTAAGGGAATCACAAGCGAAAGAGATTGATAAGGCCATAGCCGATCTCTTAATAGTAGAGAAGGGGAGAGTTCTAAAGTGTGTTGAATTGATAAGAGATTTGTCCTTGGTCAATGTTGCTGCTAGTTTGGGCAACAAGGTGGTGCCATATGTGCCCCAAAGTCCTAGTGGGGTGCTGGATGCTGGGTGCTTAAGTTATAAGAGTGATGAATTAACTGTTGGATCATGTCCAAATTCTTCACATTATAGTCAAATCCAAACACTACCAAGAGGAGCAAACCAGATGGACCTTCTAATGGAACCTCCAACAAGTCATGAAATGTGA 1092 0.4542 MAHNSNSATSNLLCSENSSTCFDDDAADGSRISHFWDHRRNVYSEHHEGGVGGSELWACFVAQSEETVRAMVEREREHLPRDDYLMRLRTGDLDLGVRREALDWIWKAHSFFGFGPLSFCLAVNYLDRFLSVFDLPKGVSWTVQLLAVACLSIAAKMEEIKVPQSVDLQVGEQKFVFEARTIQKMELLVLSTLRWQMRALTPCSFIDYFLGKITCEQHPAKSSISISLQLILGLIRGIDFLEFQPSEIAAAVAVSVLRESQAKEIDKAIADLLIVEKGRVLKCVELIRDLSLVNVAASLGNKVVPYVPQSPSGVLDAGCLSYKSDELTVGSCPNSSHYSQIQTLPRGANQMDLLMEPPTSHEM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0250 363 Gene3D - 70 286 - -
Aed6g0250 363 CDD CYCLIN 98 190 IPR013763 -
Aed6g0250 363 PANTHER CYCLINS 58 341 IPR039361 -
Aed6g0250 363 PANTHER CYCLIN-D4-1-LIKE 58 341 - -
Aed6g0250 363 Pfam Cyclin, N-terminal domain 68 197 IPR006671 -
Aed6g0250 363 Pfam Cyclin, C-terminal domain 201 292 IPR004367 -
Aed6g0250 363 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Aed6g0250 363 Gene3D - 81 198 - -
Aed6g0250 363 SUPERFAMILY Cyclin-like 60 197 IPR036915 -
Aed6g0250 363 SMART cyclin_7 103 191 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0250 Aed-Chr6 2205909 2210076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0250 62 268 Core Cell Cycle Gene Families AT5G65420 61.244 2.46e-89 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0250 K18810 - gmx:100794010 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0250 6 2205909 2210076 Aed7g1558 7 18413700 18415910 PCT