Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0242 ATGGTGGACAATATCCAAGAAGATTGTATTGATTTGGATTTGGAGGATGAAACGGATTTGGATTATGGTTTTGTTAATGAAACTAATGATGCTGATAATTGTGTTGAGAACATTGATGGAAAAAGTGATACTGCAGCTGTAGGTAATGGTCACATAAAAATATCAGAGTTAACAGCTGAGGATATACGTAGGCGTCAATTTGCATCTGAGTTTGAAGCATGTGAATTTTATCGGATGTATGCCAAAGGTGTTGGACTTGTTACCAGAAAAGATGAGATTCATCGTGATTTTAAGGGCAACATTATCATGCGACAGCTGGGTTGCAATAGACAGGGTCTAAGAAATAAAAGACACTTAATGAGAGTGGACCAAATTAGAGAGCATAGGCCTATAACTCGAACCAACTGTCCAGCCAAGTTTCGAGTACACTTTGATTACAAGACCTCAATTTGGAAGGTTGTTGCCTTGTTGGAATCTCACAACCATGAGCTAACTCCTGCAGTGTACACATTTGGTTTCTTCAAATCGTTCTATGAGTGA 540 0.3852 MVDNIQEDCIDLDLEDETDLDYGFVNETNDADNCVENIDGKSDTAAVGNGHIKISELTAEDIRRRQFASEFEACEFYRMYAKGVGLVTRKDEIHRDFKGNIIMRQLGCNRQGLRNKRHLMRVDQIREHRPITRTNCPAKFRVHFDYKTSIWKVVALLESHNHELTPAVYTFGFFKSFYE 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0242 179 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Aed6g0242 179 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 168 - -
Aed6g0242 179 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 37 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0242 Aed-Chr6 2114105 2114689 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed6g0242 FAR1 1.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0242 - - ccaj:109792835 141.354