Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0237 ATGGCTCTTCCTGGTTCCCTGCAGTTGTCCCATGGATTGGGACTTTGCAGGAACCTGGACTGCAATAAACACTCGAGGGCAACAGGACGTGGCAAGTTACATTTATTTAGTGCAGGTCCTTCATATCCTATTTGGTTCATGAGACAAGAATGCAGGGATTTTCAACAACTTCGTCATATAAACAGGCCAACACATGCATTATCTTGCAAATCCCGCTCTTTTAAGTGTCATTGTTTTTTAGTGTCAGGTCAACCAAATGAGCTTCCTGCTGTTAAGGTAGCTGCTACAGTGTTGGCTAGGTCTTGTAATGTGTTACAGAATAGTCCTATCATAGTAAAGTTGATTCCTGCTGTTGGCGTTATCATTTTTGCAGTATGGGGTGTTGGTCCATTATTCTTTCAGACAAGGAAATTACTTTTTCAGAGGAGTGATAGTAGTTGGAAGAAAAGTACCACTCACTATATAGTAACTTCTTACCTTCGGCCATTACTGTTATGGACTGGAGCAATACTTATATGCAGAGCATTGGAGCCATTAATTCTACCTTCAGAAACTAGCCAGGTTGTTAAGGAACGGCTTTTGAATTTTGTAAAATCATTGTCAACAGTACTGGCCTTCGCCTATTGTTTATCAAGTGTAATTCAGCAAGGTCAGAAATTCTTAGCAGAGAGTACTGATGCAAGTGAGGCGAGAAATATGGGGTTCCAATTTGCTGGTAAAGCTGTTTATTCTGCGGTATGGATTGCTGCCTTTTCTCTGTTCATGGAATTGCTGGGCTTCTCTACTCAGAAATGGGTCACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCTGGTCGTGAGATATTTACAAACTTTCTTTCGAGTGTGATGATTCATGCAACTCGGCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACTGTTGAGCATGTTGGCTGGTGGTCACCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTTACTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCAATTAGTCATTTGGATGTAAATAAAATTAATAACATTGTTGCTGACATGAGGAAAGTTTTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAGATCCTGAAAATCAGGCTCTTTTGATTCTGGTGTCTTGTTTTGTTAAGACCTCACATTTTGAAGAATATCTGTGTGTTAAGGAAGCTATACTGTTGGATCTTCTTAGAGTTATCGGCCATCACCGAGCCCGACTAGCCACACCGGTCCGTACCCTGCAGAAAATATACAGTGATGCTGACTTGGAGAACATACCATTTGCAGATTCGATATTTGGTCGTGGTGCAGGGACAGTACCTAACCGTCCATTATTAGTGATTGAACCATCTTACAAGATCAATGGAGATGATAAGAAAAGTCGACCATCACGGCCAGCCGTTGATCAAGACAACAAGACAGCTACGCGAACCAAAGTTGACTCCAAGACAGACAACATGACTAGAGGAACCCAAGACTACAATGAGGGGGAAACCAAAGTTGTGGCACCTAACTCTGATGCAAATGGAAACTCTAAGACAGTTGTGACACCCAAACCTGATCCTGAAGCGGCTGAAAACAAGCCGCTGAAATCAGATTCAAACAAGGAGAACATGGAGGTGCCAGAATCTTCTTCTAAATCCAAAGTAACTGGTTCTGTAGTAGATAATTCAGCCCAGAAGGACATAGATGTCAAACAATCCAAGGGTCAGACCACTAAAAACATAAAGCCAAATATTGACTCTGACAATGTGGTGTCATCAGCTAACAATGCTGACAAAACTGGTGGGATTAATACGAATATATCAACAAAACAGCAAGGGGAAAAGAAACCTGCTGCACAACAACCTCATGCATCCAGGAATGTTCTTGAAGAGAATATAGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACACTTCCCATTGATGAGGAGATTGACAATGTGACATCTCGAGAGGCAAAGGAAATGGCTGCATTGCAGCAGGGTGGACAAGAATCTCCAAAGACTCCTCCTGATGGAAATGAAAAGTAG 2166 0.4187 MALPGSLQLSHGLGLCRNLDCNKHSRATGRGKLHLFSAGPSYPIWFMRQECRDFQQLRHINRPTHALSCKSRSFKCHCFLVSGQPNELPAVKVAATVLARSCNVLQNSPIIVKLIPAVGVIIFAVWGVGPLFFQTRKLLFQRSDSSWKKSTTHYIVTSYLRPLLLWTGAILICRALEPLILPSETSQVVKERLLNFVKSLSTVLAFAYCLSSVIQQGQKFLAESTDASEARNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNIDPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFADSIFGRGAGTVPNRPLLVIEPSYKINGDDKKSRPSRPAVDQDNKTATRTKVDSKTDNMTRGTQDYNEGETKVVAPNSDANGNSKTVVTPKPDPEAAENKPLKSDSNKENMEVPESSSKSKVTGSVVDNSAQKDIDVKQSKGQTTKNIKPNIDSDNVVSSANNADKTGGINTNISTKQQGEKKPAAQQPHASRNVLEENIVLGVALEGSKRTLPIDEEIDNVTSREAKEMAALQQGGQESPKTPPDGNEK 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0237 721 Gene3D - 192 297 - -
Aed6g0237 721 MobiDBLite consensus disorder prediction 699 721 - -
Aed6g0237 721 MobiDBLite consensus disorder prediction 587 656 - -
Aed6g0237 721 MobiDBLite consensus disorder prediction 496 529 - -
Aed6g0237 721 Gene3D - 299 354 IPR023408 -
Aed6g0237 721 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 721 - -
Aed6g0237 721 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 721 IPR045042 -
Aed6g0237 721 MobiDBLite consensus disorder prediction 496 665 - -
Aed6g0237 721 MobiDBLite consensus disorder prediction 567 586 - -
Aed6g0237 721 MobiDBLite consensus disorder prediction 530 559 - -
Aed6g0237 721 Pfam Mechanosensitive ion channel 240 446 IPR006685 GO:0016020|GO:0055085
Aed6g0237 721 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0237 Aed-Chr6 2075927 2083580 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0237 9 712 Mechanosensitive Ion Channel Family AT5G10490 55.148 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0237 K22047 - gmx:100789444 1290.79