Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0230 ATGGCAAGCAAAGGTAATAATAACGGGAAAGAGTCATGGAGCGACGAGGAGTCATCACCGAGGGCGATTCTGGACCACCACCCTGTTTCGGGAACAGAGTCGGACAACAGTGGAAGTAGCGAATACTACCAAGGAAAAGAGAAGGATGGTTACGTGCCACAGTGGAAGTCGATGATCGACGTTTTCAAGTTCAAGAATGTGAAAAAGTTAACAACGGCGATTCCCCTGCTTGCTGTGAGCCATGATATCTCTCGGAAAGGTTTCGCTCAAAAACTCGCTCGTATTCGAAGTGCCGAAGATGGAATCGATATTGGATGCATTCCCACCAAACCCTCTTGGAGGAACTTCGATTATGAAGAGTTGGCTGCTGCTACTAATGATTTTAGTTCTGAGAACTTGATTGGAGAAGGTGGACATGCTGAAGTGTACAAAGGAGTGTTACCAGATGGTCAAGTTATAGCTGTGAAGAGGCTAATAAAGAACGAAAAGGAGGCTGCAGACAGAGCTGGTGATTTTTTGACAGAGCTTGGGATTATTGCACACATAAGCCACCCAAATGCAACACACCTTGTTGGCTTTGGTGTTGATCGTGGCCTCTACTTTGTCCTACAACTCGCTCCACATGGCAGTCTTTCTTCTAAGCTTTTTGGTGAATCCATCATCTCTTATTATTATTATTATTATTCTATTATTTCTGATTTTGGATTGGCAAAGTGGCTCCCAAGTAAGTGGACCAACCACGTTGTCTTCCCAATAGAAGGAACATTTGGATATTTGGCTCCTGAGTACTTTATGCATGGAGTTGTGGATGAGAAAACTGATGTGTTTGCATTTGGAGTTTTGCTATTGGAGCTTATAACAGGTCGCCGCGCCGTTGATTCCAATAGCAGACAAAGTCTTGTCGTCTGGGCCAAGCCACTTCTGGATACAAACAATGTAAAGGAATTAGCAGACCCCAGGTTAGGAGATGATTATGATCCTATCGAAATGATCCGCGCAATGGTATTGCAGCTACTGAAGGGTGAAGAGACAATTATAGAAGCAAATAAAAGTTTAGTTTCACAAAAGTCCCTCATGTTAGAGGCATGTGACCTAGAGGATTATTCTTGCTCAAATTACTTGAAGGACCTAAATCGCCACAGGCAACTAATCATGGAGTGA 1161 0.435 MASKGNNNGKESWSDEESSPRAILDHHPVSGTESDNSGSSEYYQGKEKDGYVPQWKSMIDVFKFKNVKKLTTAIPLLAVSHDISRKGFAQKLARIRSAEDGIDIGCIPTKPSWRNFDYEELAAATNDFSSENLIGEGGHAEVYKGVLPDGQVIAVKRLIKNEKEAADRAGDFLTELGIIAHISHPNATHLVGFGVDRGLYFVLQLAPHGSLSSKLFGESIISYYYYYYSIISDFGLAKWLPSKWTNHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAFGVLLLELITGRRAVDSNSRQSLVVWAKPLLDTNNVKELADPRLGDDYDPIEMIRAMVLQLLKGEETIIEANKSLVSQKSLMLEACDLEDYSCSNYLKDLNRHRQLIME 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0230 386 Gene3D Transferase(Phosphotransferase) domain 1 220 352 - -
Aed6g0230 386 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 2 223 - -
Aed6g0230 386 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 231 335 - -
Aed6g0230 386 SUPERFAMILY Protein kinase-like (PK-like) 113 305 IPR011009 -
Aed6g0230 386 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 334 386 - -
Aed6g0230 386 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Aed6g0230 386 PANTHER OS08G0249100 PROTEIN 231 335 - -
Aed6g0230 386 MobiDBLite consensus disorder prediction 1 46 - -
Aed6g0230 386 ProSiteProfiles Protein kinase domain profile. 128 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0230 386 Gene3D Phosphorylase Kinase; domain 1 93 202 - -
Aed6g0230 386 PANTHER OS08G0249100 PROTEIN 334 386 - -
Aed6g0230 386 Pfam Protein kinase domain 231 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0230 386 Pfam Protein kinase domain 129 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0230 386 PANTHER OS08G0249100 PROTEIN 2 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0230 Aed-Chr6 2001579 2006670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0230 116 334 Trihelix Transcription Factor Family AT1G68690 37.970 3.53e-39 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed6g0230 Pkinase 7.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0230 - - gmx:100818314 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0230 6 2001579 2006670 Aed7g1543 7 18057652 18064543 PCT