Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0218 ATGGCTAACTCAAAATCTAACCTGCTTCAATCTCAAAGTCCCCTTTCCACTCTACTTATCAAAATCCTCATCCCTTTCCTCTTGCTACAAAATCACAATGTCAAGTCACAATCCCCTTTTCTCTCATCAGACGAAACCTTTGGCTTCGGCTTCTCTTCTTTCAAGAAAGATGATCCAAACATATTTTTGTTGGGAAATGCAACAATATCTGGTGGGGTTGTAAGGTTAACCAACAGCGACCTATTTGGGAAACCAGTCCCACACAGTGTTGGAAGAGCAGTGCATCTCACACCGATACACCTCTGGAACAAAAACAATGGAAAACTCGCTGACTTCAGCTCCGGTTTCTCCTTTGTCGTCAACCCTGAGGGTTCAACCCTTCGTGGTGATGGCTTTGCCTTCTTTCTTGCACCCGCCAACCTTCACTTGCCCCAAAATTCAAGTGGAGGGTATCTTGGACTTTTCAACCCGAAAACTGCACTGGACCCTTCCAAAAACCAAATAGTGGCGATTGAGTTTGATAGTTTCACCAATGATTGGGACCCCTATTCTCCATACCAGGCTCCTCACATTGGAATTGATGTTGACTCTGTTAAGTCAGTGGCAACTGTACCATGGCCTAGTGAACTTGAACCTGATAACGCTGTTGCACATGCGAGCCTGAACTATAACTCCGAGTCAAAGATATTGAGTGTGTTTGTTTCTTACCCTGACAATAGGAATGCCACTGTCTCTACTATTGTTGATTTGAGGAATGTTTTGCCCGAATGGATCAGAGTTGGTTTCTCTGCTGCAACTGGTGACTTGGTTGAAACACATGACATTCTTAACTGGTCTTTCGAAGCAGCCTTGTAG 855 0.4433 MANSKSNLLQSQSPLSTLLIKILIPFLLLQNHNVKSQSPFLSSDETFGFGFSSFKKDDPNIFLLGNATISGGVVRLTNSDLFGKPVPHSVGRAVHLTPIHLWNKNNGKLADFSSGFSFVVNPEGSTLRGDGFAFFLAPANLHLPQNSSGGYLGLFNPKTALDPSKNQIVAIEFDSFTNDWDPYSPYQAPHIGIDVDSVKSVATVPWPSELEPDNAVAHASLNYNSESKILSVFVSYPDNRNATVSTIVDLRNVLPEWIRVGFSAATGDLVETHDILNWSFEAAL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0218 284 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 282 IPR013320 -
Aed6g0218 284 Gene3D - 45 284 - -
Aed6g0218 284 Pfam Legume lectin domain 49 281 IPR001220 GO:0030246
Aed6g0218 284 CDD lectin_legume_LecRK_Arcelin_ConA 49 281 IPR001220 GO:0030246
Aed6g0218 284 PANTHER LECTIN 2 284 - -
Aed6g0218 284 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 2 284 - -
Aed6g0218 284 PIRSF Plant_L_lectin 13 284 IPR016363 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0218 Aed-Chr6 1877279 1878133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0218 39 284 Receptor kinase-like Gene Family AT5G10530 36.364 3.70e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0218 - - gmx:100802694 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0218 6 1877279 1878133 Aed7g1527 7 17657030 17663571 PCT
Aed7g1526 7 17647077 17648386 Aed6g0218 6 1877279 1878133 PCT