Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0214 ATGAAAACGACTTTTTTATGTGTTCCCAGCATGAAATCAATGATTGAGAGATATAACACATTTAAGGAAGAACATCACCATCTGATAAATCCAGAATCTGAAGTCAAGTTTTGGAAAAGGGAGGCAGAAATTCTAAGGCAGCAGCTACAAAATCTACAAGAAAATCATCGGCAATTGATGGGAGAACAGCTATATGGCATGAGTGTCAGAAACCTACAAGATCTAGAGAATCAACTCGAAATGAGTCTCCAAGGTGTCCGCATGAAAAAGGAACAAATTCTAAAAGATGAAATCCAAGAGCTGAACCGAAAGGGAAACCTTATCTTCCAGGAAAACGTGGAACTCTACAAGAAGGTCTTTGGTACAACAGAAATGGCCACAACAAGCAGAAATGCATTTGTTCCACTTCCATATGGTATGCATGCAGGAGGGAATCCACAAGAAGTGGTTCAGCTTCAGTTATGCCAGCCTGAACAAGAAGCCTATGAGACATCGGACACCGCCACAAAATGA 513 0.4074 MKTTFLCVPSMKSMIERYNTFKEEHHHLINPESEVKFWKREAEILRQQLQNLQENHRQLMGEQLYGMSVRNLQDLENQLEMSLQGVRMKKEQILKDEIQELNRKGNLIFQENVELYKKVFGTTEMATTSRNAFVPLPYGMHAGGNPQEVVQLQLCQPEQEAYETSDTATK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0214 170 Coils Coil 72 92 - -
Aed6g0214 170 ProSiteProfiles K-box domain profile. 35 125 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed6g0214 170 Pfam K-box region 32 119 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed6g0214 170 Coils Coil 35 62 - -
Aed6g0214 170 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 9 169 - -
Aed6g0214 170 PANTHER SERUM RESPONSE FACTOR HOMOLOG 9 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0214 Aed-Chr6 1850988 1853649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0214 9 168 MADS-box Gene Family AT2G22630 52.299 3.74e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0214 K09264 - gmx:100778427 295.819