Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0208 ATGATGGAATTACCAGATATTTGGATATTAAGACTGGTTGTGGCATGTGTTTTTTGTCTGCATGTATTTATCAGATCGGCTTCTAGCTCTGCAACTGAAGGGTTTGAAAACATAGCATGCTGTGCTGATTCAAATTACACAGATCCGCAAACCACCTTAAATTACACAACAGATTACAGATGGTTCCCTGATAAAGGAAGTTGCAGAAGAACTAAAGATGTGTTAAATGAAAAAGTTCGACTGTTTTTTGTAGATGAAGGAAAGAGATGTTACAATTTGGCAACAATTAAGAATAAAGTATATCTGATAAGAGGCACATTTCCATTCGATGGTGTAAGTTCTTCCTTCAATGTTTCAATTGGGGTAACACAATTAGGTGCAGTGAGTTCATCCAGTCGCCAGGACTTGGAAATTGAGGGAATTTTCAGGGCTACCAAAGACTACATAGACTTCTGCTTAGTGAAGGGGGAAGGGGATCCCTTTATTTCTCAGCTTGAATTAAGGCCATTACCTGAAGAGTATTTACATGATTTGCCTGCCAGTGTTTTAAAACTGATAAGCAGAAATAGTCTTTGGGACACAGAAGATGAAATCAGGTTCCCAATTGACCCAAATGATAGAATCTGGAATGCACCTTCAAGTCCATCATCTGCTCATGTATTATTATCTTCCAATGTCAGCAATTTTAACCTCAAATCCAATGTGACACCACCTCTACAAGTCCTACAAACGGCTCTTACCCACCCTGAGCGATTGCAGTTCATCCACAGTGGCCTTGACACTGAGGATAATGAATATCGTGTATTTCTCTACTTCCTTGAATTAAATAGCACTGTCAAAGCAGGAAAAAGGGTGGATATGTCTGCACGCAATTTCAAAGGACCAATTCCTTCCAGTATCACTAATATGACCAACTTAAAACTACTGAACCTGAGCCACAACAATTTCAATAGTTATATCCCCTCGTTTCCACTGTCTTCCTTGCTGATATCAATAGATCTTAGTTACAATGATCTTACGGGATCACTTCCTCGATCAATTGTCTTACTGCCACATCTAAAATCGTTGTTTGGACAAGTATTCGTGATTGGTGCTATTACGTGTGGATCACTTTTGATTACTTTGGCTGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCATGGGAAGGATTTGGTGGAAAGAACTACTTAATGGAAACAAATGTCATATTCTCTTTGCCAAGCAAAGATGATTTCTTAATAAAGTCTGTATCAATTCAACCATTCACTTTGGAAGATATAGAGGTGGCCACAGAAAGGTACAAAACTTTGATTGGAGAAGGAGGATTTGGTTCTGTTTACCGTGGCATTCTAAGCGAAGAGCAAGAAGTGGCAGTGAAAGTCCGATCAGCCACATCAACTCAGGGAACTCGAGAATTTAATAATGAGCATGAGAACCTGGTGCCTCTTCTTGGTTACTGCAATGAAAATGATCAACAAATCCTCGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGTTTGGCATATCTTCACACATTTCCAGGACGTTCAGTAATACACAGGGACGTGAAATCAAGCAATATACTTCTAGATCATAGCATGTGTGCTAAGGTTGCCGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTAATGTTTCCCTTGAAGCCAAGCCATATATAAGAGCATCAAAGATGGATGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCCTTCTCAGCATATAGACCAAACATGGTTGACATTGTCCGCGAATTAGAGGATGCTCTCATCATAGAAAACAATGCATCAGAATACATGAAGTCCATAGACAGCCTTGGAGGGTCAAACCGTTACTCTATTGTCATAGAGAAAAGGGTGCTGCCTTCAACTTCATCAACAGCAGAATCAACCATCACAACCCAAGCCTTATCCCACCCACAGCCAAGATAG 2040 0.402 MMELPDIWILRLVVACVFCLHVFIRSASSSATEGFENIACCADSNYTDPQTTLNYTTDYRWFPDKGSCRRTKDVLNEKVRLFFVDEGKRCYNLATIKNKVYLIRGTFPFDGVSSSFNVSIGVTQLGAVSSSSRQDLEIEGIFRATKDYIDFCLVKGEGDPFISQLELRPLPEEYLHDLPASVLKLISRNSLWDTEDEIRFPIDPNDRIWNAPSSPSSAHVLLSSNVSNFNLKSNVTPPLQVLQTALTHPERLQFIHSGLDTEDNEYRVFLYFLELNSTVKAGKRVDMSARNFKGPIPSSITNMTNLKLLNLSHNNFNSYIPSFPLSSLLISIDLSYNDLTGSLPRSIVLLPHLKSLFGQVFVIGAITCGSLLITLAVGIIFVCRYRQKLIPWEGFGGKNYLMETNVIFSLPSKDDFLIKSVSIQPFTLEDIEVATERYKTLIGEGGFGSVYRGILSEEQEVAVKVRSATSTQGTREFNNEHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEAKPYIRASKMDEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSAYRPNMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSSTAESTITTQALSHPQPR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0208 679 Gene3D Phosphorylase Kinase; domain 1 408 503 - -
Aed6g0208 679 SMART serkin_6 436 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0208 679 ProSiteProfiles Protein kinase domain profile. 436 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0208 679 PANTHER OS05G0525400 PROTEIN 78 565 - -
Aed6g0208 679 PANTHER OS07G0107800 PROTEIN-RELATED 78 565 - -
Aed6g0208 679 PANTHER OS07G0107800 PROTEIN-RELATED 568 640 - -
Aed6g0208 679 Gene3D Ribonuclease Inhibitor 192 359 IPR032675 -
Aed6g0208 679 SUPERFAMILY Protein kinase-like (PK-like) 416 626 IPR011009 -
Aed6g0208 679 PANTHER OS05G0525400 PROTEIN 568 640 - -
Aed6g0208 679 Gene3D Transferase(Phosphotransferase) domain 1 504 570 - -
Aed6g0208 679 Pfam Malectin-like domain 42 284 IPR024788 -
Aed6g0208 679 SUPERFAMILY L domain-like 282 357 - -
Aed6g0208 679 Pfam Protein kinase domain 439 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0208 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Aed6g0208 679 ProSitePatterns Protein kinases ATP-binding region signature. 442 464 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0208 Aed-Chr6 1808132 1815066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0208 253 659 Receptor kinase-like Gene Family AT3G46400 31.507 5.06e-52 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed6g0208 Malectin_like 3.2e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0208 - - aip:107642298 553.132