Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0175 ATGGCACCTTCATTCGACACTAGTACTCACACGGTATGCGTGATGGATGCTTCGGGCCACTTGGGCTTCACCCTCGTACAAAAACTCCTCCAAAGGGGCTACAACGTTCACGCCTCTCTTCAAAAATATGGGGAAGAAAACCTATTCAATGGGATTTCATCTGATCCCGAAAAGCTCAAGGTTTTTCGATCTGACCCTTTTGATTACCACAGCATAACCGATGCACTCAAAGGTTGCTCTGGTTTGTTCTACACATTCGAACCTCCCCATGACCAACCCAATTATGATGAATACATGGCAGACGTGGAAGTAAGAGCAGCACACAACGTGCTGGAAGCATGTGCTCAGACAGAAACTATAGATAAAGTGATTTTCACATCCTCAGCTACCTCAGTGGTTTGGAGGGAGGATCGCAAGACCATGGAACTAGATCTAGATGAGAGGCATTGGAGTGATGTCAATTTCTGTCGCAAATTCAAGTTATGGCATGGGGTGTCAAAGACAATGGCAGAGAAGAGCGCGTGGGCCTTGGCAATGGACAGAGGAGTGAACATGGTGTCTATCAACGCAGGCTTATTGATGGCTCACGATCTCTCCATCAAACTTCCTTACCTAAGAGGAGCCGCTGAGATGTACGAGGATGGGGTGTTTGTGACCGTTGATTTGGGCTTCTTGGTCGATGCTCACATCTGCGTCTACGAGGATGTCTCATCCTACGGTCGTTACTTGTGCTTCAACCACATCATCAACACCCACGACGACGCCGTTCAGCTCGCACGCAAGTTGACTCCTGGTGCTTCCTCCTCCTTGCCGCAAAGTGATGACTATGGTAAGAATTTTATCGAACAGAGAATTAGCAACAAGAAGTTGAACAAATTGATGGTGGACTTCGAGACTTGA 900 0.4744 MAPSFDTSTHTVCVMDASGHLGFTLVQKLLQRGYNVHASLQKYGEENLFNGISSDPEKLKVFRSDPFDYHSITDALKGCSGLFYTFEPPHDQPNYDEYMADVEVRAAHNVLEACAQTETIDKVIFTSSATSVVWREDRKTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMDRGVNMVSINAGLLMAHDLSIKLPYLRGAAEMYEDGVFVTVDLGFLVDAHICVYEDVSSYGRYLCFNHIINTHDDAVQLARKLTPGASSSLPQSDDYGKNFIEQRISNKKLNKLMVDFET 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0175 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 264 IPR036291 -
Aed6g0175 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 298 - -
Aed6g0175 299 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 5 298 - -
Aed6g0175 299 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Aed6g0175 299 CDD FR_SDR_e 12 295 - -
Aed6g0175 299 Gene3D - 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0175 Aed-Chr6 1536882 1540069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0175 11 297 Monolignol Biosynthesis Gene Families AT5G58490 31.250 3.70e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0175 - - gmx:100793329 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0175 6 1536882 1540069 Aed6g0175 6 1536882 1540069 ECH