Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0163 TTTGATATCTTATCCTCCTGCGTTGTCTCAGTAACTAGGTGGTGCAGAAGAGGGAAATTTGATAAACATAGCAGTTCTCAGGGTTTCAGGAAGGTCGATCCAGATCGCTGGGAATTTGCAAATGAGGGTTTTTTGAAGGGTCAAAAGCACTTGCTTAAGACTATAACTCGACGAAAACCTGCCCATGGTCAGAATCATCAACAGCCTCAGCAACCACATGGACAGAGTTCTTCAGTAGGGGCATGTGTAGAAGTTGGGAAGTTTGGGCTTGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGGTTGAGGCAGCAGCAACAAACCACTGATAACCAGCTGCAAGCAATGATTCAGCGCTTTCAGGGAATGGAGCAACGACAGCAGCAAATGATGTCATTCCTTGCAAAAGCTGTTCAGAGCCCTAGCTTCTTTAATCAGTTTGTACAACAGCAAAATGAGAGCAATAGGCGCATAACTGAAGTCAATAAAAAACGTCGGCTTAAACAGGAAGGTATTGCTGAAACAGATCATGCTACTGCTCCAGATGGACAAATAATTAAATATCAACCTATGGTGAATGAAACAGCAAAAGCAATGCTTAGGCAGATGATGAATTGGGATACTTCTCGTACGGAATCTCTTGATAAAAACCCTGATAACTACATGATTGGTGATGTGATTGGTGATGCTTCATCATCTTCCAGTGGTGCAATGGACAGTAGCAGCTCTTCAGGCTGGACTTCTGGAGTAACTCTTAAAGAGGTCTCTCCAGCTTCAGTGCAGTCTTCACACATTCCAGCTGCAACTGGGACTCAAGGGCATGCCCCCTCAACTGTTGAACCTGAAGTTTTATCTGTACCACAAGCAGTAGCTTCTGAAAATGTTATGAATGGTGGAGCTCATGATGCACCTTCTATCCCTGTTTCTCAAGCAAATGTGATGATCCCTGATCTTCCTCCAATAACAGAGATGGTGACAGGAAATATTCTTGGCATTCCTGAAGAAAATTATATGGCAACTGAGACAGATGAGGGATATATGGATCCTTCATTGGGGGCTGGTGGGTCATTTCCTGTTGATTTTGAAGATATTTCACCTGATGTAGACATTGATGATCTCTTAGGCAATCCTTCTATTTGGGATGAAATTTTGCAAACTCCAGTTCCAGAGGATATCGATATCAATGTGGCTGAAGTATCCATGGGGAATGAGGTCCAGCCAACGGAAAATGGATGGAGCAAAACTCAACATATGGATCACCTTACAGAGCAGATGGGTCTTCTTTCTTCCAGTGCAAAAAGGGTTTGA 1335 0.433 FDILSSCVVSVTRWCRRGKFDKHSSSQGFRKVDPDRWEFANEGFLKGQKHLLKTITRRKPAHGQNHQQPQQPHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQAMIQRFQGMEQRQQQMMSFLAKAVQSPSFFNQFVQQQNESNRRITEVNKKRRLKQEGIAETDHATAPDGQIIKYQPMVNETAKAMLRQMMNWDTSRTESLDKNPDNYMIGDVIGDASSSSSGAMDSSSSSGWTSGVTLKEVSPASVQSSHIPAATGTQGHAPSTVEPEVLSVPQAVASENVMNGGAHDAPSIPVSQANVMIPDLPPITEMVTGNILGIPEENYMATETDEGYMDPSLGAGGSFPVDFEDISPDVDIDDLLGNPSIWDEILQTPVPEDIDINVAEVSMGNEVQPTENGWSKTQHMDHLTEQMGLLSSSAKRV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0163 444 MobiDBLite consensus disorder prediction 264 287 - -
Aed6g0163 444 SMART hsfneu3 1 58 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aed6g0163 444 MobiDBLite consensus disorder prediction 59 78 - -
Aed6g0163 444 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 27 430 IPR027725 -
Aed6g0163 444 Gene3D - 5 59 IPR036388 -
Aed6g0163 444 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 27 430 - -
Aed6g0163 444 Coils Coil 87 114 - -
Aed6g0163 444 MobiDBLite consensus disorder prediction 61 78 - -
Aed6g0163 444 MobiDBLite consensus disorder prediction 239 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0163 Aed-Chr6 1444367 1447057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0163 20 438 HSF AT1G32330 47.936 7.66e-118 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0163 K09419 - gmx:100815121 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0163 6 1444367 1447057 Aed6g0163 6 1444367 1447057 ECH