Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0153 ATGGAGCTATTCCCAGCGCAACCAGACTTGTCCTTACAAATCAGCCCTCCAAACACGAAACCGGCAACATCAAGTTGGAGGAGAAGCACTACAGAAGAAGACATGGATTTGGGGTTTTGGAAGAGAGCCTTGGACTCAAGAAACTCCATACAATCAATGGCGAAACAACAAGACTCTTGCTTCGACCTCTCCCTCTCCAATCCAAAAGCCTCATCAGATAATAATAATCACTCCAACCTCATTCACCACTTCCAAAACAGTGCCACCACCACCACCAACAACAACAACAACAACAACAACCCCTTCCAACCCTTTCAGCAAAACCACTTCTTCCACCAGCAGCAGCCACTGTTCCAGCCTCACCAAAGCCTAAGCCAAGACCTTGGGTTCCTAAGACCCATTAGAGGAATCCCAGTGTACCAAAACCCTCCCCCTATACCATTCACTACTCAACACCATCATCATCTTCATCATCTTCCTCTAGAAGCTTCCACTACCACCCCTTCTTCTATTATCTCCAACACAAACACTGGCTCCACCCCTTTTCACTCTCAGGCTCTCATGAGATCAAGGTTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGAGCTCCAAGGATGCGTTGGACTTCTACCCTCCACGCTCGCTTTGTTCATGCCGTTGAACTCTTGGGTGGCCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTCAAGGATCTCACTTTGGCACATGTTAAGTCTCATTTGCAGATGTACCGGACGGTGAAAACTACAGATAGGGCGGCGGCTTCATCAGGGCAATCGGATGTGTATGATAATGGGTCGTCTGGAGATACTTCTGATGACTTAATGTTTGACATAAAATCTTCAACAAGGTCTGATCTATCCATTAAACAGGGAAGATCAAGTGTTAATCAAGATAAGGAATATCATGGTCTTTGGGGCAATTCTTCCAGGGAAGCTTGGTTGCATGGGAAGACAAAGGCTGATTCTGTTGGAAACGTGGCTTCTCTTGAGAAGGAAATGGATCCAAAGTGCTTAAGCTATGAGAGAACATCAGATGGAAGTTCATCATCAAACCTTTCAGGATCAAGCCCGAAGAAGCTTAATTTGGATTTGGAATTCAGCTTAGGCCAGCCACTTTAA 1158 0.4603 MELFPAQPDLSLQISPPNTKPATSSWRRSTTEEDMDLGFWKRALDSRNSIQSMAKQQDSCFDLSLSNPKASSDNNNHSNLIHHFQNSATTTTNNNNNNNNPFQPFQQNHFFHQQQPLFQPHQSLSQDLGFLRPIRGIPVYQNPPPIPFTTQHHHHLHHLPLEASTTTPSSIISNTNTGSTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDIKSSTRSDLSIKQGRSSVNQDKEYHGLWGNSSREAWLHGKTKADSVGNVASLEKEMDPKCLSYERTSDGSSSSNLSGSSPKKLNLDLEFSLGQPL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0153 385 MobiDBLite consensus disorder prediction 354 373 - -
Aed6g0153 385 MobiDBLite consensus disorder prediction 1 31 - -
Aed6g0153 385 SUPERFAMILY Homeodomain-like 202 258 IPR009057 -
Aed6g0153 385 MobiDBLite consensus disorder prediction 11 26 - -
Aed6g0153 385 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 205 258 IPR006447 GO:0003677
Aed6g0153 385 Gene3D - 204 261 - -
Aed6g0153 385 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 384 IPR044847 GO:0000976|GO:0006355|GO:0010158
Aed6g0153 385 MobiDBLite consensus disorder prediction 352 373 - -
Aed6g0153 385 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0153 Aed-Chr6 1380856 1386256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0153 1 384 G2-like Transcription Factor Family AT4G17695 37.624 4.93e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed6g0153 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0153 - - gmx:100798081 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0153 6 1380856 1386256 Aed6g0153 6 1380856 1386256 ECH