Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0152 ATGTGGCGAGCCTTGTTGTCCTTCGAGGCTTGCTTAACGAAGACGGAGGCCTACAGGGAGCGAGTTCCTAATGAAATGGTGGAAAGAAGAGTGACTCTATCTAAGGAAGTTAGAAATGGGTTAGAACTTTTGAAGCGCAAAAGGCTTCAGCGTGCAAAATCTGTCACTGCCACCCAGACAAGTGTTGCTAACATGATGAACAGAAAAACTTTCAAGGTTGCCCAAATCGATTTTACGGCTCTTGGAAGCATCAATTCCGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCCATAGGTGATTGGTTTCCTTTAGGGGCTATTGCTAGCAGAAGATATGCACTTCTGAACAGGGTTCCTTTATTGCCCCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTTCGTACATGCTTGGAACTTGAAGATTCTGACTTCCCTTCTTCAGACTTGTTTTCTCATAATAGCATTAAGATTTCATTTGTTAACTTGATGCGTTTCCAACACTGTGCTCGATGGTTCCTAACGAAATCAAGGGCGAGTATAAGCGTCTCTTCTCATTCCCATGGCACTATTCTCTGTAGCCTTTGCAAACGTGACTGTTACATAGCTTATGTTGACTGCAACTGTCACATGCATCCTGTATGCCTACGTCATGATGTTGATTCTCTTGACTTTAACTGTGGGAGCAAACTCACACTTTATTTGAGGGAGGATATTATGGATATGGAAGCTGCAGCCAAGATGTTTGAGCAGGAAGATGGGATATTGGATGAGATAAGGAAGCGAACTAAAAGTGACCAAAATATGTATGCATATCCTTTGTCAAATATGTTTCCGAGAGCTGAGGCAAATGGATACACACCTTATTGTGAGCTAAAACTTGATTCTGTTGTTGAATTTTATGCAACTCCAGAGCACTCAACAAATAATCAAGAATATAGTTCACGTAATGAATCTGCAACTGTACATTGCTCTGAAAATCTAAAATCTGTGGTGTCTGAGGTTTCCTTTTCTTCTGCCACATCCACTCTTTGCTCTCTTTCAGAATCTCTTGAGAGCTTTTCGGCTCCCAAAAATGCCGAGGGACATACAAACATCAATGCAAGAATTATGGATTTTGAAGAGTTTGCTGAAAGAATATCCAACAGTGCATGTGAATCTTCATTATCTCCTGCTGTGTATCATGAAAATCCGGTTAAACCTCTGGGTGATCTTCAGAGATTTGATACAAAACCCGTAGTGGATGAGAGTGATGATTCTGATTCAGAGATATTTAGGGTAAAGCGCCCTTCTTCTCTGAAAGCAGAGAGGAGAATTATGAATGATGTGTCTTCAAAGCATACTGAGCATCAGGGACTAAAACGTCTGAAGAAAATCCTTCCTCCTGAAGGAAAGAGTGGGCAACCAATGGATTATAGCAGAAGCAATGAATCAAGTTACAAATACAGTCACCCTGATAGTGGTAGCCATAAAGGTCTTGCTGAAATTTCCTCCAGGGACAGATTTGCAAGGAGTAATGGCGTTCCCATTTCTGTAAGATATAAGAAGTCGGGCAACGAGGAAATAAGCATGCAACGAGATCACCACCAACACCACCACCGGAGAGATAGGTTGCAGCAGCAGACATTTAGGGAACCGCCTTCCATGGAGCATGAGCCAAAGCGCCTTAAAGTACGAGGCCCTTCATATTTAGGCTTAGAGAGCAGATCAGATCGAATTGATGGTTTCAAGCCTCCTAACATTTGGGGAATCTGCACGGGTGGTGATCCTCTGGGTTCTCGGGCCGAGCAATGTGGTGTTGCTGTGTTTGGCACTCAAATTTGCAAAATGTGGAGCTAG 1839 0.4263 MWRALLSFEACLTKTEAYRERVPNEMVERRVTLSKEVRNGLELLKRKRLQRAKSVTATQTSVANMMNRKTFKVAQIDFTALGSINSGFNCGEAVNFAIGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLLRTCLELEDSDFPSSDLFSHNSIKISFVNLMRFQHCARWFLTKSRASISVSSHSHGTILCSLCKRDCYIAYVDCNCHMHPVCLRHDVDSLDFNCGSKLTLYLREDIMDMEAAAKMFEQEDGILDEIRKRTKSDQNMYAYPLSNMFPRAEANGYTPYCELKLDSVVEFYATPEHSTNNQEYSSRNESATVHCSENLKSVVSEVSFSSATSTLCSLSESLESFSAPKNAEGHTNINARIMDFEEFAERISNSACESSLSPAVYHENPVKPLGDLQRFDTKPVVDESDDSDSEIFRVKRPSSLKAERRIMNDVSSKHTEHQGLKRLKKILPPEGKSGQPMDYSRSNESSYKYSHPDSGSHKGLAEISSRDRFARSNGVPISVRYKKSGNEEISMQRDHHQHHHRRDRLQQQTFREPPSMEHEPKRLKVRGPSYLGLESRSDRIDGFKPPNIWGICTGGDPLGSRAEQCGVAVFGTQICKMWS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0152 612 MobiDBLite consensus disorder prediction 522 555 - -
Aed6g0152 612 MobiDBLite consensus disorder prediction 437 461 - -
Aed6g0152 612 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 86 567 - -
Aed6g0152 612 Pfam C5HC2 zinc finger 193 244 IPR004198 -
Aed6g0152 612 Gene3D Cupin 78 136 - -
Aed6g0152 612 PANTHER LYSINE-SPECIFIC DEMETHYLASE 86 567 - -
Aed6g0152 612 MobiDBLite consensus disorder prediction 437 500 - -
Aed6g0152 612 MobiDBLite consensus disorder prediction 469 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0152 Aed-Chr6 1361686 1368770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0152 82 224 JUMONJI Transcription Factor Family AT1G08620 27.273 4.05e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0152 - - gmx:100798611 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0152 6 1361686 1368770 Aed6g0152 6 1361686 1368770 ECH