Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0151 ATGTATGGGGATTGCCAAGTTATGTCAAGTATGGGAGGGAACGTATCAGACACTCTCTTCTCTTCCTCGATCCAGAACACTAACTTCAACTTCATACCAACCATGCCTTTTCATCAACCTTTTCCTTCCATGGTAAAAGAAGAAGATGGGATCTTGCGAGGGAAGGAAGAGATGGAAAGTGGATCAGGAAGTGAACAAGTTGAAGACAAGTCAGGGAATGAGCAAGAGAGTGATCAACAACCCACAAAGAAGAAACGTTATCACAGGCACACTGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCACACCCAGATGATAAGCAGAGGCTGAAACTGAGCCATGAATTGGGCCTGAAACCGCGCCAGGTCAAGTTCTGGTTCCAGAACCGTCGAACCCAGATGAAGGCACAACAAGACCGGTCAGATAATGTGATACTTAGAGCTGAAAATGAGACTCTAAAGAGTGAGAACTATCGGTTACAAGCAGCACTCCGCAGTGTTATTTGTCCCAATTGTGGTGGCCCATGCATAATAGGTGCTGATATGGGCTTGGATGAACACCAACTTCGCATTGAAAATGCCCGCTTAAGAGAAGAGTTAGAACGCGTGTGTTGTCTCACCACAAGATACACTGGGCGTCCAATGCAAACAATGACAGGTCCTACTCTCATGGCACCTTCATTGGATTTGGACATGAACATATATCCAAGGCACTTTGCGGACCCTAACATTGCTCCTTGCTCTGAAATGATTCCTGTGCCAATGTTACCACCTGAATCTTCACCGTTTTCTGAGATTGGATCAGTCCTAATGGAAGAAGAGAAGTCTCTGGCCTTGGACCTTGCGGCTTCCTCAATGGCTGAACTTGTGAAGATGTGTCAGACAAACGAGCCACTTTGGATCCGCAGTGGCAGCTGTGAGAGTGAAAGGGAAGTGCTTAATTTTGAAGAGCATGCAAGGATGTTTGCTTGGCCTCAGAATCTCAAGGACCGAAGTGAGCTTAGGACTGAAGCTACTCGTGACACTGCTATGGTTATAATCAATAGTGTCACTCTTGTTGATGCTTTCCTTGATGCTCAAAAATGGATGGAATTGTTTCCTACAATCGTTTCTAGAGCCAAAACGATCCAAATCATATCTTCTGGTGCTTCGGGTCATGCAAGCGGGACTCTTCAGCTGATGTATGCAGAATTTCAAGTTCTTTCTCCTTTGGTGTCCACTCGTGAGACTCATTTTCTTCGGTATTGTCAACAAAATGCTGAGGAGGGAACCTGGGCCATTGTTGATTTCCCTGTTGATAGCTTTCACCAAAATTTTCACCCTTCTTATCCAAGATACTGCAGGAGGTCCTCTGGCTGTGTGATTCAAGATATGCCAAATGGGTATTCAAGGGTAACATGGGTTGAGCATGCAAAAATAGAAGAGAAACCTGTGCACCAGATATTCTGCAACTATGTGTACAGTGGAATGGCATTCGGAGCACAGCGTTGGTTAGGAGTTTTGCAGAGACAATGTGAGAGGGTCGCAAGCCTCATGGCCAGAAACATATCAGATCTTGGAGTGATACCTTCGCCAGAAGCCCGAAAGAACTTGATGAAACTGGCTCAAAGAATGATAAAAACGTTTAGCCTTAACATGAGTACCTCTGGTGGACAATCATGGACAGCAATATCAGATTCCCCTGAAGACACTGTTAGAATCACAACTAGGAAAATCACAGAGCCTGGCCAACCCAATGGCGTGATTCTGAGTGCAGTTTCAACCACTTGGTTGCCCTATTCTCACACCAAGGTCTTCGATCTCCTCAGGGACGAACGCCACAGATCTCAGATGGATGCGCTTTCCAATGGGAACTCCTTGGTAGTGTACACCACCATCGACGTGGACTCGATCCAGCTAGCCATGAGTGGCGAGGACCCTTCTTGCATTGCGCTTCTTCCGCAAGGGTTCAAGATAGTGCCAATGCTATCATCACCCAACAACGTTGATGATGACACACCCATCATCGATGCCAACTCAGGTGCAGGTGCAGGTTGCCTCCTAACCATGGGGCTGCAGGTTCTGGCGAGCACAATCCCCTCTGCAAAGCTCAACCTTTCGAGTGTGACCGCCATCAACAACCACCTCTGCAACACCTTGCACCAGATTGAAACTGCTCTTTCTAGCCCCCATGGCCATCATGAGAATGGTGGTGCAACTTTCCTAATGTGCGCTGAACCCACCAGTAGTGGTGCACCACCTCCCATGCATAAAGAGGTGAGAATAGCAAGTTTCATATTTTTACGGAATAATACCGGGCTAGACTGGGCTGATTGCTTTGCCTCCCGGAAGCTTAAGCCCATCAAATAG 2361 0.4684 MYGDCQVMSSMGGNVSDTLFSSSIQNTNFNFIPTMPFHQPFPSMVKEEDGILRGKEEMESGSGSEQVEDKSGNEQESDQQPTKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHELGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENETLKSENYRLQAALRSVICPNCGGPCIIGADMGLDEHQLRIENARLREELERVCCLTTRYTGRPMQTMTGPTLMAPSLDLDMNIYPRHFADPNIAPCSEMIPVPMLPPESSPFSEIGSVLMEEEKSLALDLAASSMAELVKMCQTNEPLWIRSGSCESEREVLNFEEHARMFAWPQNLKDRSELRTEATRDTAMVIINSVTLVDAFLDAQKWMELFPTIVSRAKTIQIISSGASGHASGTLQLMYAEFQVLSPLVSTRETHFLRYCQQNAEEGTWAIVDFPVDSFHQNFHPSYPRYCRRSSGCVIQDMPNGYSRVTWVEHAKIEEKPVHQIFCNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIKTFSLNMSTSGGQSWTAISDSPEDTVRITTRKITEPGQPNGVILSAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLVVYTTIDVDSIQLAMSGEDPSCIALLPQGFKIVPMLSSPNNVDDDTPIIDANSGAGAGCLLTMGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIETALSSPHGHHENGGATFLMCAEPTSSGAPPPMHKEVRIASFIFLRNNTGLDWADCFASRKLKPIK 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0151 786 Pfam START domain 285 511 IPR002913 GO:0008289
Aed6g0151 786 Pfam Homeodomain 84 139 IPR001356 GO:0003677
Aed6g0151 786 ProSiteProfiles START domain profile. 275 514 IPR002913 GO:0008289
Aed6g0151 786 ProSiteProfiles 'Homeobox' domain profile. 81 141 IPR001356 GO:0003677
Aed6g0151 786 SUPERFAMILY Homeodomain-like 71 142 IPR009057 -
Aed6g0151 786 PANTHER - 74 623 - -
Aed6g0151 786 PANTHER - 619 732 - -
Aed6g0151 786 MobiDBLite consensus disorder prediction 55 83 - -
Aed6g0151 786 CDD START_ArGLABRA2_like 279 510 - -
Aed6g0151 786 ProSitePatterns 'Homeobox' domain signature. 116 139 IPR017970 GO:0000981|GO:0006355
Aed6g0151 786 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 74 623 IPR042160 -
Aed6g0151 786 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 619 732 IPR042160 -
Aed6g0151 786 Gene3D - 68 153 - -
Aed6g0151 786 Gene3D - 337 495 IPR023393 -
Aed6g0151 786 SMART START_1 284 511 IPR002913 GO:0008289
Aed6g0151 786 MobiDBLite consensus disorder prediction 55 91 - -
Aed6g0151 786 SUPERFAMILY Bet v1-like 529 721 - -
Aed6g0151 786 CDD homeodomain 84 142 IPR001356 GO:0003677
Aed6g0151 786 SUPERFAMILY Bet v1-like 276 513 - -
Aed6g0151 786 SMART HOX_1 82 145 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0151 Aed-Chr6 1343787 1349771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0151 23 726 Homeobox Transcription Factor Family AT5G46880 53.125 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aed6g0151 START 5.1e-38 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0151 - - gmx:100812829 1296.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0151 6 1343787 1349771 Aed6g0151 6 1343787 1349771 ECH
Aed6g0151 6 1343787 1349771 Aed1g2235 1 18614904 18619999 ECH
Aed6g0151 6 1343787 1349771 Aed7g0543 7 3997530 4001353 ECH