Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0143 ATGGCAGCAGAATCCGAAGCGCTGCGCCTGAAGGCCATGGCGGAGTCAAAGTTCAAAGCCGCCAACAACGCCAAATCCGCTCTCAAGTACGCCAAGCGCGCCCAAAGTCTCTGCCCGCACCTAGCCGGAGTATCGGAGACCGTCGCCTCTCTCACCGTCCTCGCCGCGCCGGACTGGTACCGCGCCCTCGGCGCTGAGCCCTTCGCGAGCAGCACCGTCATCCGGAGGCAGTACAAGAAGCTCGCGCTGCTCCTTCACCCCGACAAGAACCCCCACGTGGCGTCCGAGGAGGCCTTCAAGCTCATCGGCGAGGCCTTCCACTTTCTCTCCGACAGGAACCGCCGCCGAGAGTACGACGCCGAGCTCCGCCGCAGGATCGAGGCGGAGAGCGAGAGCGAGACGTTCTGGACGGCTTGCTCCACTTGCAGGCTCCTGCACCAGTTTGAGAGGAGGTACTTGGGGAATGAGTTGGTGTGTCCGAGTTGTGAGAAGAGTTTTAGGGCTGTGGAAGCGGTTCAGGGTGATGGGGTTGTGGATGGGGATGGAGAAGGTAGGGTTCGGAGTATGAGATTGAAGTTGAAAGAGATTGAAAAGAGGAAACTTGGGGTGAATGGGAGAGTGGGTGGTGAGAAGGAAAAGGGATTGAGGAAGAGAATGCGTTCTGTTGGAGAGGTTTTGGAGAGGGCTAAGGCTAATAAGAGGGTTAAAAATGGGGAGGAAACGATGACATTGGCTGAGTTTCAGAATGAGGTGAAGAGAAAGTTGCAGAGGAAAAAGTTGGAGGAAAAAGAAAAAGCAAAGGAAAAGGATGGAAATGAGAAGAGGAGCAATCGGGCGGAGAGGCGGCAAGGATTGAGAAACAATGGAGATTTAGAGATTGTGGAAGTGAGGGGTTTGAAGAAGAGTGTGAAGCCTGCGATTGAGGAGAAGAGGAAGGGGTTGAGAATTCAGAAGCGTGGGGGTTCTAGTGCAGGGGAGTTGGGGAACATGGCGGTGGTGGATTCGGATTTTTATGATTTTGACAAAGATAGAGTGGAGAGAAGCTTTAAGAAAGGCCAAGTGTGGGCAGCGTATGACGACGATGATGGAATGCCGAGGAGTTATGCCTTGATCGATGAAACTGTTTCTGTGAATCCTTTTGGAGTGAGGGTAAGTTGGTTGGATGTACAGAACATTGGGGATGGGAGGATAGTTAGTAGGGAGAAAATGGGGTTTCATGTACCTTGTGGGAAATTTAAGGTTGCCAGGAAGGCTTCTGTGAATTCAGTGAATATCTTTTCTCATGTTGTGGATTGTGACAGGGCTGCGCGTGAGGTTTACAAAATTTACCCCAAGAAGGGCTCAGTATGGGCCCTTTATGGCGAGGGAAGTACTGACGCCAACGAGGGCAAGAGATGTTATGACATTGTTGTGTTTTTGACGAGTTACAATGAGGTGAATGGTCTGAGCATGGCGCATCTTGAGAAGGTTGATGGTTACAAGACAGTATTTAAGAGACAGGAGAAGGGGAGTGGTGCTATTAGATTTCTTGGGAAGGATGACATGTGGTTAGCTTCTCATCAGATTCCTGCAAGGAAGCTTCTCTGTGATGAAACTCCTGAACTGTTGAAAGGCTGTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTACTATTGGTAGATAG 1671 0.5093 MAAESEALRLKAMAESKFKAANNAKSALKYAKRAQSLCPHLAGVSETVASLTVLAAPDWYRALGAEPFASSTVIRRQYKKLALLLHPDKNPHVASEEAFKLIGEAFHFLSDRNRRREYDAELRRRIEAESESETFWTACSTCRLLHQFERRYLGNELVCPSCEKSFRAVEAVQGDGVVDGDGEGRVRSMRLKLKEIEKRKLGVNGRVGGEKEKGLRKRMRSVGEVLERAKANKRVKNGEETMTLAEFQNEVKRKLQRKKLEEKEKAKEKDGNEKRSNRAERRQGLRNNGDLEIVEVRGLKKSVKPAIEEKRKGLRIQKRGGSSAGELGNMAVVDSDFYDFDKDRVERSFKKGQVWAAYDDDDGMPRSYALIDETVSVNPFGVRVSWLDVQNIGDGRIVSREKMGFHVPCGKFKVARKASVNSVNIFSHVVDCDRAAREVYKIYPKKGSVWALYGEGSTDANEGKRCYDIVVFLTSYNEVNGLSMAHLEKVDGYKTVFKRQEKGSGAIRFLGKDDMWLASHQIPARKLLCDETPELLKGCWELDPASLPSDLLTIGR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0143 556 CDD DnaJ 58 111 IPR001623 -
Aed6g0143 556 Pfam DnaJ domain 58 119 IPR001623 -
Aed6g0143 556 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 5 555 - -
Aed6g0143 556 SUPERFAMILY Chaperone J-domain 51 123 IPR036869 -
Aed6g0143 556 SMART dnaj_3 57 114 IPR001623 -
Aed6g0143 556 MobiDBLite consensus disorder prediction 256 286 - -
Aed6g0143 556 PANTHER BNAC03G44070D PROTEIN 5 555 - -
Aed6g0143 556 Coils Coil 244 272 - -
Aed6g0143 556 ProSiteProfiles dnaJ domain profile. 58 122 IPR001623 -
Aed6g0143 556 PRINTS DnaJ domain signature 78 93 IPR001623 -
Aed6g0143 556 PRINTS DnaJ domain signature 94 114 IPR001623 -
Aed6g0143 556 PRINTS DnaJ domain signature 60 78 IPR001623 -
Aed6g0143 556 Pfam Domain of unknown function (DUF3444) 330 528 IPR024593 -
Aed6g0143 556 Gene3D DnaJ domain 45 141 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0143 Aed-Chr6 1272337 1274007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0143 5 183 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.469 2.35e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0143 - - gmx:100813361 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0143 6 1272337 1274007 Aed6g0143 6 1272337 1274007 ECH