Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0142 ATGATTGGGAGGGAAAAAGGTGTAATGTATGGGTTGGTTCCTGTTGTTATGGGCAGCAGTGAGATGGATAAAACTCCAAAAGAGAAGGAGTCAAAGACGCCGCCACCACCTACGTCACAGGAGCAGTCTTCGACCACTGGCACTGGAACAATTAATCCCGAGTGGCCTGGCTTTCAGGCATATTCTCCCATGCCAACACATGGTTTCTTGGCATCAAGTCCCCAGGCTCACCCTTATATGTGGGGTGTCCAGCAATTTATGCCTCCCTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCCCCTGGTGGCATTTATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGCATTGCTGAGGCTTCGGGAAACACTCCTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATCACGGGGAAAAATAATGAACATGGTAAAACACCGGGTACATCTGCTAATGGAATTCATTCAAAGAGTGGTGAAAGTGCAAGTGAAGGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAAAATGACTCTCAATTGAAATCAGGGGGCAGGCAGGATTCTTTTGAAGATGAACCATCTCAAAATGGCAGTTCGGCATATACTTCTCAAAATGGGGGACTAAATACACCTCATACGGTAGTCAATCAAACTATGTCTATGATACCTATCTCTGCAGGTGGTGCCCCTGGAGCTGTTCCTGGCCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTACACCAGCTTCATCCAACATTCCTGGACTTGGCAGAAAGGTTCCATCTACTGCAGTTGCTGGAGGGATGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAGGATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGATTGCGCAAGCAGGCCGAGTGTGATGAGTTAGCTCAGCGTGCTGATGCTTTGAAGGAAGAAAATGCTTCTCTCCGGTCAGAAGTAAATCGAATTAGGAGTGAGTATGAACAGCTACTCTCCGAGAATGCAACTCTCAAGGAGAGACTTGGGGAACTACCTGCGAACGATGATCATCGTAGGTCTGGCAGGAACGAACAGCATGTGGGTAATGACACTCAACAGAGTGGGCAGACAGAGGCTGTGCAGGGTGGTCATTAG 1290 0.4721 MIGREKGVMYGLVPVVMGSSEMDKTPKEKESKTPPPPTSQEQSSTTGTGTINPEWPGFQAYSPMPTHGFLASSPQAHPYMWGVQQFMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTPGTSANGIHSKSGESASEGEGTSEGSDANSQNDSQLKSGGRQDSFEDEPSQNGSSAYTSQNGGLNTPHTVVNQTMSMIPISAGGAPGAVPGPTTNLNIGMDYWGTPASSNIPGLGRKVPSTAVAGGMVTVGSRDSAQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVNRIRSEYEQLLSENATLKERLGELPANDDHRRSGRNEQHVGNDTQQSGQTEAVQGGH 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0142 429 Coils Coil 344 392 - -
Aed6g0142 429 CDD bZIP_plant_GBF1 329 379 IPR045314 GO:0003700|GO:0006355
Aed6g0142 429 MobiDBLite consensus disorder prediction 394 410 - -
Aed6g0142 429 MobiDBLite consensus disorder prediction 386 429 - -
Aed6g0142 429 Pfam Disordered region downstream of MFMR 152 291 - -
Aed6g0142 429 MobiDBLite consensus disorder prediction 35 55 - -
Aed6g0142 429 SMART brlzneu 324 388 IPR004827 GO:0003700|GO:0006355
Aed6g0142 429 Pfam bZIP transcription factor 324 386 IPR004827 GO:0003700|GO:0006355
Aed6g0142 429 MobiDBLite consensus disorder prediction 163 248 - -
Aed6g0142 429 MobiDBLite consensus disorder prediction 128 248 - -
Aed6g0142 429 Gene3D - 327 381 - -
Aed6g0142 429 MobiDBLite consensus disorder prediction 19 58 - -
Aed6g0142 429 PANTHER G-BOX-BINDING FACTOR 3-RELATED 17 429 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aed6g0142 429 MobiDBLite consensus disorder prediction 411 429 - -
Aed6g0142 429 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 331 346 IPR004827 GO:0003700|GO:0006355
Aed6g0142 429 SUPERFAMILY Leucine zipper domain 327 383 IPR046347 GO:0003700|GO:0006355
Aed6g0142 429 MobiDBLite consensus disorder prediction 326 348 - -
Aed6g0142 429 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 17 429 - -
Aed6g0142 429 Pfam G-box binding protein MFMR 17 113 IPR012900 -
Aed6g0142 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 326 389 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0142 Aed-Chr6 1264530 1271956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0142 17 423 bZIP Transcription Factor Family AT2G35530 61.575 2.16e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed6g0142 MFMR_assoc 5.8e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0142 K09060 - gmx:778122 754.592