Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0135 ATGGCAGGTGAAGTAGACGATAGTCTTTCTGAATATAGAAAACTGTACGAGTTTGTGGAAGAAGGTAATTCGGACGGGACAAGGGCATTCATCCAAGGGGATACGAGTGTGCTAAATAAGCCATCGGCTTCAGGTAGGACGATTCTTCACGATGCAACAATGACCGGGCATGTGAACGTTGTTGAGGTGTTAGTGACAGAAGGCGGTTACAGACTAGTAAAAGCGCAAGACAAGGAGGGTTATACAGCTCTTGCTCTTGCTGCTCACTACACTGGAAACACCGATGTAGCAAGGTGCATGGTAGAGAACAAAGACGGCCACGAAGAACTGCTTGGTATACCTATAAAGAATGAATACGGTACTAATACTGAAATCCCTCTTCTTCTGGCTGCTGATAAGGGACACAAACAAATGACTCGCTTCCTTTACGGCAAAACTCCCAAGAATGTGCTCTACGGACTCGATTCCGGCAATCGACTAGTTTTGCTGTTCGAACGATGTATCAAAGCGGAAATATTTGATGTGGCTCTGAACATACTTGATCAAAGGCAACAACTACAACTGGTCACTGAATCCGTATTGAAGGATTTGGCTCAAATGCCTTCAGCATTCTTAAGTGGCCGCCAGTTCGGAATTCCAGGGGAAATTATTGACCATAGTAAGTTTTTGCACTTTTCTTACCCAATGTCTTTTCTCTCTCGAATTAACCATCTAATTAATTAA 723 0.4357 MAGEVDDSLSEYRKLYEFVEEGNSDGTRAFIQGDTSVLNKPSASGRTILHDATMTGHVNVVEVLVTEGGYRLVKAQDKEGYTALALAAHYTGNTDVARCMVENKDGHEELLGIPIKNEYGTNTEIPLLLAADKGHKQMTRFLYGKTPKNVLYGLDSGNRLVLLFERCIKAEIFDVALNILDQRQQLQLVTESVLKDLAQMPSAFLSGRQFGIPGEIIDHSKFLHFSYPMSFLSRINHLIN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0135 240 ProSiteProfiles Ankyrin repeat profile. 44 68 IPR002110 GO:0005515
Aed6g0135 240 ProSiteProfiles Ankyrin repeat region circular profile. 44 68 - -
Aed6g0135 240 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 42 202 - -
Aed6g0135 240 SUPERFAMILY Ankyrin repeat 14 145 IPR036770 -
Aed6g0135 240 Gene3D - 6 157 IPR036770 -
Aed6g0135 240 SMART ANK_2a 79 109 IPR002110 GO:0005515
Aed6g0135 240 SMART ANK_2a 44 74 IPR002110 GO:0005515
Aed6g0135 240 SMART ANK_2a 122 152 IPR002110 GO:0005515
Aed6g0135 240 Pfam Ankyrin repeats (3 copies) 39 103 IPR002110 GO:0005515
Aed6g0135 240 PANTHER CASKIN 42 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0135 Aed-Chr6 1225749 1227962 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0135 5 96 MAP Kinase Kinase Kinase AT2G31800 35.870 8.05e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0135 - - ccaj:109800452 199.904