Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0130 ATGGGTTACGAAGACAATCCGTATCGTGATGAGGACGGGGAGCCCTTGATGGACTTCGACGACGTTCAGTCCGACCGCGAGCCCTCTCCGGAGCCTCGTCGCCAGCCCGACGATTTCGAGGAGGACGTCGACGAGTGGCCCGGCGGCCGCGATCGCTCGCAGACGCCGGTCTACGACACCGATCCGTCGCGGTCGAAGCCGCGTAAGAGGTTGATCAAGAAGGGCGACGCCGGGAAGCAGGCGGTGGCGCCGGAGCTGGAGGATGAGGAAGAGGAGGGGTATGTTCCCGAGGCGATGTTCGACGAGGTGGACGCTGGGAGGAAGAGGAAGAAGGGGAAGGAGGTTGAGAGTGGGAAGAAGGAGAAGAGGATGAAGGGGGAGAAGAGGTTTGGGAGTAGCGGTGGAAAGGGTGCGTCCAAATTCGGGAGTTCTAAGAAAGGGTTTGGAGGGAAGGCAGGGAAGGATCATGATGGCGAAGTTAAGGAGATGTGGGATACAATTGCTGGGGGAGATTCTGAGGATGATCAAGAGGGTGACAGGAATATGGATGATGACAACTTTATAGATGACACTGGAGTGGAACCTGCTTATTATGGTAGTGATGAACCACGTTCTCCTGGTGATGCTCCCCAGGCAGAGGAGGGTGAAGAGAATGATGAAATTAAGGACCTTTTCAAGATTGGTAAGAAAAAGAAGAAGAATGAGAGAACTCCTGGAGAAATAGCTTTATTAGTTGAGAATGTCATGGCTGAGCTTGAAGTTACAGCTGAGGAGGATGCTGAATTTAATCGCCAGGGAAAGCCTGCCATTAATAAACTCAAGAAGTTGGATCTTCTTACAGAAGTCCTCTCAAAGAAACAGCTTCAACTAGAGTTTTTGGATCATGGAGTGCTAACTTTATTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGCTTGCCTAATATAAATATACGCTCAGAAATTTTGAAGATTTTGAATGATTTTCCTATAGATCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTTGGAAAGGTAATTATGTTTTTATCCAAGTCCGATGAAGAAATCAATGCAAATAGGAAACTAGCCAAGGAGCTGGTTGATAAGTGGAGCCGGCCTATATTTAATAAGAGCACCCGGTTTGAAGACATGAGAAATGTGGAGGATGAGAGGGTTCCTTATAGGAGGCCATCAGTTAAAAAGTACTCTATTCCATCTGCTGCATTAGTGCCTGCAAATAAAGCTGCAGGAATGGAATCTAGAGACAGTGACCTTGATTTGGAACTTTCACAGCCTAGGTCTGGACAATCCTCTTCTAGACAGCATGCATCAAGGCCAGAAGCAACGCCTTTGGATTTTGTGATCCGTCCCCAGTCTAAAATTGATCCAGAAGAAATTAGAGCACGTGCAAAACAAGCTGCACAAGATCAGCAGCGTATGAAGATGAATAAGAAGTTGCAGCAATTGAGGGCACCAAAAAAGAAGCAACTTCAGGCTACAAAGCTGAGCGTGGAAGGTCGTGGCATGATCAAATATTTATAA 1557 0.4753 MGYEDNPYRDEDGEPLMDFDDVQSDREPSPEPRRQPDDFEEDVDEWPGGRDRSQTPVYDTDPSRSKPRKRLIKKGDAGKQAVAPELEDEEEEGYVPEAMFDEVDAGRKRKKGKEVESGKKEKRMKGEKRFGSSGGKGASKFGSSKKGFGGKAGKDHDGEVKEMWDTIAGGDSEDDQEGDRNMDDDNFIDDTGVEPAYYGSDEPRSPGDAPQAEEGEENDEIKDLFKIGKKKKKNERTPGEIALLVENVMAELEVTAEEDAEFNRQGKPAINKLKKLDLLTEVLSKKQLQLEFLDHGVLTLLKNWLEPLPDGSLPNINIRSEILKILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINANRKLAKELVDKWSRPIFNKSTRFEDMRNVEDERVPYRRPSVKKYSIPSAALVPANKAAGMESRDSDLDLELSQPRSGQSSSRQHASRPEATPLDFVIRPQSKIDPEEIRARAKQAAQDQQRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMIKYL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0130 518 MobiDBLite consensus disorder prediction 434 450 - -
Aed6g0130 518 MobiDBLite consensus disorder prediction 149 168 - -
Aed6g0130 518 ProSiteProfiles TFIIS N-terminal domain profile. 299 382 IPR017923 -
Aed6g0130 518 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 238 385 IPR035441 -
Aed6g0130 518 MobiDBLite consensus disorder prediction 101 130 - -
Aed6g0130 518 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 294 382 IPR035441 -
Aed6g0130 518 PANTHER PROTEIN IWS1 HOMOLOG 1 1 518 IPR044204 GO:0009742|GO:0032784
Aed6g0130 518 PANTHER PROTEIN IWS1 HOMOLOG 1 1 518 - -
Aed6g0130 518 MobiDBLite consensus disorder prediction 1 220 - -
Aed6g0130 518 MobiDBLite consensus disorder prediction 418 504 - -
Aed6g0130 518 Pfam TFIIS helical bundle-like domain 324 379 IPR017923 -
Aed6g0130 518 MobiDBLite consensus disorder prediction 1 49 - -
Aed6g0130 518 MobiDBLite consensus disorder prediction 169 190 - -
Aed6g0130 518 MobiDBLite consensus disorder prediction 463 479 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Aed6g0130 Med26 1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0130 K17498 - gmx:100812819 848.58