Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0117 ATGGCAGATAGTTCAGTATCGTTTTTATTGGACAAGCTGACTCTGTTACTTCAAGCAGAAGTGAATCTGCAGAGAGGGGTCCGTGAAGATGTTCAGCACATCAAATACGAACTAGAACGCCACAGGGGAATCTTGCGTGTAGCTGATGCTCTTGAAGACAAAGACCCTGAACTCAGAGCATGGGTTAAACGAGTAAGAGATGTTGCTCACGACATGGAAGACGCCATAGACGAATTCAACCTCCGTCTTCTTGATCAACATGGACAACCCAACAACTCTTCTTTACACAAGTTTTTCTTCCGCCATAAGATTGCTTCAAACATACAAGGCATCAAAGCTAGAGTGGACGTTATATCCCAGGGACGTCCAAACATACCTGTGATAGCCTCAGGCTCAGGATCAAGTCAAAGGTTGAGGGTTGATAGCCAAGGAGATGCACTTCTTCTGGAAGAAGCTGATTTGGTTGGCATTGACAAACCCAAAAAGCAAATCAGTGATTTGCTTTTCAATGATGAAGTTGGTAGGTCTGTGATTCCCATTTATGGGATGGGAGGGTTGGGGAAAACCACCTTGGCGAAACAAGTCTATGATGATCCTAGAGTGCAGAAGCGTTTCAGGATCCATGCTTGGATTAGTGTTTCTCAGAGTTTCAAACTTGAGGAGCTTCTGAAAGACCTTGTTCAGCAACTCTATAATGTCATTGGCAAACCGGCTCCGGAAGCAGTTGGACAAATGAAAAGTGACCAGCTCAAAGTGCTGATCAAGAACTTGCTTCAGCAAAGTAGGTACCTCATTGTGCTGGATGATGTGTGGCATGTTAAGGTATGGGATTCTGTCAAACTCGCTTTGCCTAATAACAACCGTGCTAGTAGAGTGATGCTCACCACGCGTAAGAAAGACATAGCATTGTATTCATGTGCTGAATTGGGTAAGGATTTCAACCTTGAGTTCTTACCTGAGGAGGAAGCTTGGTATCTTTTCTGCAAGAAAACGTTTCAGGGTAACACTTGTCCTTCTCATCTGGAGGTGGTTTGCAGGAACATCTTGAAAATGTGTGGGGGGTTGCCACTGGCAATTGTGGCAATTGGTGGTGCTTTGGCTACAAAAGGCCAGGCAAACATAGAAGAGTGGCAGATGGATGCACCTTTGGAGCTTTTTCCTGATGAAATTGTCAGCCTTTACCTTCTAAAGTATCTGAGTCTGAAGAACACAAAGCTGAAAACCATTCCAGGTTCCATTAAGAGGCTGCAGCAGTTGGAGACACTAGATCTCAAACACACTCATGTCACTGTATTGCCAGTTGAAATCGTGGAGCTCCAACGATTACGCCATCTCTTGGTGTATCGCTATGAGATCGAATCCTATGCTGATTTGCATTCAAGGCATGGCTTCAAGGTGTCTGCCCCTATAGGACTAATGCAATCTTTGCAAAAGCTGTGTTTTATAGAGGCAGATCAGACTTTGATGATTGAGCTAGGAAAACTCACTCAACTCAGGAGGCTTGGCATCAGAAAGATGAGAAAACAAGATGGTGCAGCTTTGTGTGCATCCATCGAGAAGATGATCAATCTCCGCTCGCTGTCCATAACTGCAATCGAAGATAATGAGATAATTGACATACACAACATTTCCAGGCCTCCTCAGTATCTCCAGCAGTTGTACTTGTGTGGACGTCTAGACAATTTCCCCCGCTGGATAAGTTCTCTCAAGAGCTTGGTCCGCGTGTTTCTGAAATGGAGCCGGTTGAAAGAGGATCCTCTGGTGCATCTCCAGGATTTGCCAAATCTAAGACATCTTGAGTTTCTACAAATTTACGTCGGTGAGACATTGAATTTCAAGGCTAATGGGTTTCCTAGTTTGAAGGTGTTAGGCCTTGATGATTTAGATGGACTCAAATCTGTGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATCATCCAGCGATGTGATTCATTGAAGCAGGTACCGTTAGGCATTGAATACTTGACAAAACTGAAATCAATAGAGTTTTTTGACATGCCTGAAGAATTGATCACAACACTGCGTCCAAATGGTGGTGAGGACTATTGGAGAGTGCAACATGTCCCTGCAGTTTATTCCTCGTATTGGAGGGATGGAGGTTGGGATGTGTACTCATTAGAGACATTAGGAGAGCGAGAGGCTGATTCCACTCGCGGTACTGCAGTGAGAAGTCTTGATTTTTGTACTCTCTGGAAGGTTTAA 2232 0.444 MADSSVSFLLDKLTLLLQAEVNLQRGVREDVQHIKYELERHRGILRVADALEDKDPELRAWVKRVRDVAHDMEDAIDEFNLRLLDQHGQPNNSSLHKFFFRHKIASNIQGIKARVDVISQGRPNIPVIASGSGSSQRLRVDSQGDALLLEEADLVGIDKPKKQISDLLFNDEVGRSVIPIYGMGGLGKTTLAKQVYDDPRVQKRFRIHAWISVSQSFKLEELLKDLVQQLYNVIGKPAPEAVGQMKSDQLKVLIKNLLQQSRYLIVLDDVWHVKVWDSVKLALPNNNRASRVMLTTRKKDIALYSCAELGKDFNLEFLPEEEAWYLFCKKTFQGNTCPSHLEVVCRNILKMCGGLPLAIVAIGGALATKGQANIEEWQMDAPLELFPDEIVSLYLLKYLSLKNTKLKTIPGSIKRLQQLETLDLKHTHVTVLPVEIVELQRLRHLLVYRYEIESYADLHSRHGFKVSAPIGLMQSLQKLCFIEADQTLMIELGKLTQLRRLGIRKMRKQDGAALCASIEKMINLRSLSITAIEDNEIIDIHNISRPPQYLQQLYLCGRLDNFPRWISSLKSLVRVFLKWSRLKEDPLVHLQDLPNLRHLEFLQIYVGETLNFKANGFPSLKVLGLDDLDGLKSVTVEEGAMPGLKKLIIQRCDSLKQVPLGIEYLTKLKSIEFFDMPEELITTLRPNGGEDYWRVQHVPAVYSSYWRDGGWDVYSLETLGEREADSTRGTAVRSLDFCTLWKV 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0117 743 Pfam Rx N-terminal domain 6 93 IPR041118 -
Aed6g0117 743 Gene3D - 317 382 IPR042197 -
Aed6g0117 743 Gene3D - 5 117 - -
Aed6g0117 743 Gene3D Ribonuclease Inhibitor 483 685 IPR032675 -
Aed6g0117 743 CDD RX-CC_like 2 119 IPR038005 -
Aed6g0117 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 378 IPR027417 -
Aed6g0117 743 PANTHER OS08G0539900 PROTEIN 1 132 - -
Aed6g0117 743 SUPERFAMILY L domain-like 383 678 - -
Aed6g0117 743 PRINTS Disease resistance protein signature 639 655 - -
Aed6g0117 743 PRINTS Disease resistance protein signature 177 192 - -
Aed6g0117 743 PRINTS Disease resistance protein signature 352 366 - -
Aed6g0117 743 PRINTS Disease resistance protein signature 257 271 - -
Aed6g0117 743 Pfam NB-ARC domain 159 378 IPR002182 GO:0043531
Aed6g0117 743 PANTHER OS08G0539900 PROTEIN 147 379 - -
Aed6g0117 743 PANTHER OS08G0539900 PROTEIN 396 705 - -
Aed6g0117 743 Gene3D Ribonuclease Inhibitor 383 481 IPR032675 -
Aed6g0117 743 PANTHER DISEASE RESISTANCE PROTEIN RP 1 132 IPR044974 GO:0006952
Aed6g0117 743 PANTHER DISEASE RESISTANCE PROTEIN RP 147 379 IPR044974 GO:0006952
Aed6g0117 743 PANTHER DISEASE RESISTANCE PROTEIN RP 396 705 IPR044974 GO:0006952
Aed6g0117 743 Gene3D - 146 307 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0117 Aed-Chr6 1069552 1072365 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0117 155 394 WRKY Transcription Factor Family AT5G45050 25.000 8.13e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0117 K13457 - gmx:100305458 679.478