Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0114 ATGGCAGCTTGCACTGTCTACTCAACACAATCTCTGACCACAAATTGCTCCATCCCAACCCCATCATCAAAGACACAACTAAGTTTCTTCAACCAAAAGCAGGTAGTTTTCTACACCACAAGCAGCAGAAGAAACAGCAAGAAGAGCAACAACAGCAACATCAGCAGCAACAGAAGCTATGTGATAACATGTGCAGCCGGTGACTCACAGACAGTGGTGATTGGCCTAGCTGCAGACTCAGGGTGTGGGAAGAGCACCTTCATGAGGAGGCTAACAAGTGTGTTTGGAGGAGCAGCAGAGCCACCAAAGGGTGGAAACCCTGACTCCAACACTCTCATCAGTGACACCACCACTGTCATATGCTTGGATGATTACCACTCATTGGACAGAACTGGCAGAAAGGAAAATGGTGTCACTGCACTTGACCCTAGAGCCAACGATTTTGATCTCATGTATGAGCAGGTTAAAGCTCTCAAGGATGGAATCTCTGTTCAGAAACCAATCTACAACCATGTCACTGGCCTCTTGGATCCACCTGAGCTCATCAAACCCCCCAAAATCTTAGTCATTGAAGGCTTGCACCCAATGTTTGATTCCCGGGTGAGAGATCTCTTGGATTTTAGCATATACCTAGACATTAGCAATGAGGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGACACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCATATATTGATCCACAAAAGCAATACGCAGATGCAGTGATAGAAGTGTTGCCAACACAACTGATACCGGATGACAACGAGGGTAAGATATTGAGAGTGAGGTTGATACAGAAAGAGGGGGTTAAGTACTTTAGCCCTGTTTACTTGTTTGATGATGGCTCTACCATTTCATGGATACCATGTGGAAGGAAACTTACTTGCTCCTACCCTGGCATCAAATTCTTCTATGGACCTGACACCTACTACGGAAATGAGGTGTCAATTGTGGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATACGTAGAGAGCCACCTAAGCAACCTCTCAACCAAGTTCTATGGAGAGGTTACACAGCAGATGTTGAAGCATGCTGATTTCCCCGGCAGCAACAATGGCACTGGTCTCTTCCAAACCATTGTTGGTTTGAAGATAAGAGATCTATATGAGCAGCTAATAGCCACCAAGGCTGAGACTCCAGTATCTGCAAAAGCTTAA 1251 0.4508 MAACTVYSTQSLTTNCSIPTPSSKTQLSFFNQKQVVFYTTSSRRNSKKSNNSNISSNRSYVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKENGVTALDPRANDFDLMYEQVKALKDGISVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPDTYYGNEVSIVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQLIATKAETPVSAKA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0114 416 Pfam Phosphoribulokinase / Uridine kinase family 73 271 IPR006083 GO:0005524|GO:0016301
Aed6g0114 416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 341 IPR027417 -
Aed6g0114 416 PANTHER PHOSPHORIBULOKINASE 6 414 - -
Aed6g0114 416 PANTHER URIDINE KINASE 6 414 - -
Aed6g0114 416 ProSitePatterns Phosphoribulokinase signature. 222 235 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aed6g0114 416 PRINTS Phosphoribulokinase family signature 240 263 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aed6g0114 416 PRINTS Phosphoribulokinase family signature 222 239 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aed6g0114 416 PRINTS Phosphoribulokinase family signature 78 95 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aed6g0114 416 PRINTS Phosphoribulokinase family signature 187 205 IPR006082 GO:0005524|GO:0005975|GO:0008974
Aed6g0114 416 Gene3D - 68 303 IPR027417 -
Aed6g0114 416 CDD PRK 73 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0114 Aed-Chr6 1047399 1051590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0114 125 299 PRT Gene Family AT3G27440 27.778 1.00e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0114 K00855 - gmx:100807126 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0114 6 1047399 1051590 Aed6g0114 6 1047399 1051590 ECH