Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0112 AGCCGACTCAACTTTACTAGAAGCGCATTATCAACTCTTCATAATTTCACTGCATTGCACATTTACACCATTCTCTCTCAGTTCTCTAAATCAAAATCAATGGCGGCAAATGTAACCTGCGACATGCTCCTCACTCACCACCCTCATTGGTTCTCACCAAAATCCGGAATTTACAACAGCAAACACGCCCCAGTGGACCTTCCCAACGACCCTTTTCTCGACTTTGTTTCCTTCATTTTTTCCCACCTCCATAATGGGGTTTCGGCCCTCGTTGATTCTTCATCTGGGTGTTCCATTTCTTACTCAAAGTTGTTACCTTTGGTCAAATCCGTTGCTTCTGGTCTTCACAGAATGGGTCTTTCACAAGGTGACGTGGTTCTGCTTCTTCTCCCAAATTCCATTTACTACCCCATTGTGTTCTTGGCTGTTCTCTATCTTGGTGCTGTTGTTGCACCCTTGAATCCTCTTAGTAGTGTCTATGAAATACGCAGGCAGGTTGATGAGTGTGGTGTGAGTCTGGCTTTTACTGTGCCTGAAAATGAGAAGAAACTAGAGCCATTCGGAATTTCTATCATTGCTGTGCCAGAAAATGAGAAGGGTTTGAAGGATGGTTGCTTTTCATGCTTTTTTGAGTTGATTTCTTGTGACTTTGATTTGCCTAAAAGGCCTGTTATTAAGCAGGATGATACTGCTGGGATATTGTATTCTTCAGGGACTACTGGTGTGAGCAAAGGGGTTGTTCTGTCTCATAAGAATCTTGTTGCTATGGTTGAGCTTTTTGTGAGGTTTGAAGCTTCTCAATATGAAGCCTCTTGCTTGAGGAATGTGTTTCTGGCTGTTTTGCCAATGTTTCATGTGTATGGTTTATCACTATTTGCTCTGGGACTGCTGTCTTTGGGTTCTACTGTCGTTGTGATGAGGAAATTTGACATAGATGAGGTCATCAGGGTGATTGATGAATACAAAGTTACACACTTTCCTGTTGTTCCACCAATGTTGACAGCATTGATGACAAGGGCAAAGAGTATTATTAATGGCTGTAAGTTGCAAAGTTTGATTCAGGTCTCCAGCGGTGCAGCACCTTTGAGCACGGGAGTTATTAACAACTTTCTCCAAACTTTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCAACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCGCAATTATTCTTCCATAGGGTTATTGGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAATACTGGTGCATTTTTGCCCCCAGGCAGCAGTGGTGAGCTTTGGTTGAGAGGGCCTTCAATTATGACGGGATACTTGAATAACGAGGAAGCTACAATGTCAACAATTGATCAAGATGGTTGGCTGCATACTGGAGATGTTGTTTATTTTGATCATGACGGGTATTTACACATATCTGACCGCTTGAAAGATGTCATCAAATACAAGGGCTTTCAGATTGCTCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCTGAAATTGTTGATGTTGCTGTTACAGGTGCTATGGATGAAGAAACTGGGGAGATGCCAGTGGCATTTGTGGTCAGGAAGGTTGGAAGTGTGCTGTCTCCAAAGCATATTATGGATTATGTTGCTGAGCGGGTTGCTCCACATAAGAAGGTCAGGAAAGTGTTCTTCACTGACAAGATACCAAGGTCTGCCACTGGGAAGATCCTACGAAAGCAACTGAGAAATTGCTTGACTTCTAAACTATAA 1764 0.4252 SRLNFTRSALSTLHNFTALHIYTILSQFSKSKSMAANVTCDMLLTHHPHWFSPKSGIYNSKHAPVDLPNDPFLDFVSFIFSHLHNGVSALVDSSSGCSISYSKLLPLVKSVASGLHRMGLSQGDVVLLLLPNSIYYPIVFLAVLYLGAVVAPLNPLSSVYEIRRQVDECGVSLAFTVPENEKKLEPFGISIIAVPENEKGLKDGCFSCFFELISCDFDLPKRPVIKQDDTAGILYSSGTTGVSKGVVLSHKNLVAMVELFVRFEASQYEASCLRNVFLAVLPMFHVYGLSLFALGLLSLGSTVVVMRKFDIDEVIRVIDEYKVTHFPVVPPMLTALMTRAKSIINGCKLQSLIQVSSGAAPLSTGVINNFLQTFPNVDFIQGYGMTESTAVGTRGFNTEKFRNYSSIGLLAPNMEAKVVDWNTGAFLPPGSSGELWLRGPSIMTGYLNNEEATMSTIDQDGWLHTGDVVYFDHDGYLHISDRLKDVIKYKGFQIAPADLEAVLILHPEIVDVAVTGAMDEETGEMPVAFVVRKVGSVLSPKHIMDYVAERVAPHKKVRKVFFTDKIPRSATGKILRKQLRNCLTSKL 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0112 587 Pfam AMP-binding enzyme C-terminal domain 499 573 IPR025110 -
Aed6g0112 587 Pfam AMP-binding enzyme 88 489 IPR000873 -
Aed6g0112 587 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 586 - -
Aed6g0112 587 SUPERFAMILY Acetyl-CoA synthetase-like 88 583 - -
Aed6g0112 587 Gene3D - 485 585 IPR045851 -
Aed6g0112 587 Gene3D - 56 484 IPR042099 -
Aed6g0112 587 CDD 4CL 67 579 - -
Aed6g0112 587 ProSitePatterns Putative AMP-binding domain signature. 233 244 IPR020845 -
Aed6g0112 587 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 42 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0112 Aed-Chr6 1031423 1034739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0112 48 587 Monolignol Biosynthesis Gene Families AT4G19010 58.258 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0112 K01904 - gmx:100804808 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0112 6 1031423 1034739 Aed6g0112 6 1031423 1034739 ECH