Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0108 ATGGAGAGTGGAGGAGGAAGAGAAGGTTACAATGGAGTGGTGATGACGATGACACGCGACCCGAAGCCGAGGCTAAGGTGGACGGCAGATCTTCATGAACGGTTTGTGGATGCTGTCACAAAGCTTGGTGGCCCCGATAAGGCGACTCCTAAGTCTGTTCTGAGGTTAATGGGCTTGAAAGGGCTGACACTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGACTCGAAAACAAAATGAGGAGGAAGTGCACAAAGAGAATAGTAGATGTTCGTATGTAAATTTTAGTAGTCTTTCTTCAGCGGCTAACACCAGTTGTTTCAGAGGTGATGATGAAGGGGGAGAAATCCCAATAGCAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGATTGGAAGAGCAGCTAGAGGTGCAGAAGAAATTGCAGATGAGAATAGAGGCACAAGGGAAGTATTTGCAATCGGTGTTAGAGAAAGCTCAGAGGAGCCTTTCCCTGGATGGACCAGGCAGTGTTGAAGCATCAAGAGCTCAGTTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAACAAAACATAATTGAAGTGAATGATTTTTATAGGGATCAAATTAAACCCAAGGTTGAAGGGGGTTCAATACAGTTTGACTTAAACATCAAAGGTGGTAGCAATTTCATATAG 720 0.4278 MESGGGREGYNGVVMTMTRDPKPRLRWTADLHERFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQTRKQNEEEVHKENSRCSYVNFSSLSSAANTSCFRGDDEGGEIPIAEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQSVLEKAQRSLSLDGPGSVEASRAQLTEFNSALSNFMENMNKDSKQNIIEVNDFYRDQIKPKVEGGSIQFDLNIKGGSNFI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0108 239 Pfam Myb-like DNA-binding domain 25 75 IPR001005 -
Aed6g0108 239 SUPERFAMILY Homeodomain-like 22 79 IPR009057 -
Aed6g0108 239 Gene3D - 21 79 - -
Aed6g0108 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Aed6g0108 239 Coils Coil 124 154 - -
Aed6g0108 239 Pfam MYB-CC type transfactor, LHEQLE motif 122 167 IPR025756 -
Aed6g0108 239 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 234 IPR044848 GO:0003700
Aed6g0108 239 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 234 - -
Aed6g0108 239 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 77 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0108 Aed-Chr6 1009695 1011631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0108 13 193 G2-like Transcription Factor Family AT3G24120 52.632 1.26e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed6g0108 Myb_DNA-binding 7.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0108 - - gmx:100810146 406.757